Coccomyxa subellipsoidea: COCSUDRAFT_28915
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Entry
COCSUDRAFT_28915 CDS
T02914
Name
(RefSeq) hemolysin A
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_28915
Enzymes [BR:
csl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
COCSUDRAFT_28915
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
COCSUDRAFT_28915
Ribosome biogenesis [BR:
csl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
COCSUDRAFT_28915
23S rRNA modification factors
COCSUDRAFT_28915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
17041553
NCBI-ProteinID:
XP_005648105
JGI:
28915
UniProt:
I0YYU2
LinkDB
All DBs
AA seq
258 aa
AA seq
DB search
MQNPKKRRLDEVCLEQYPEHSRSVIQSWIAQGKVAINGRVITKAGTPVASTSTVDITAVA
PKFVCSRAGLKLEGALDHFGLDVSGMRVLDAGLSTGGFTDCLLQRGATHVIGVDVGYGQV
AERVRTDARVTVMERTNLRYVQLGDLPEALPVDLATLDLSFISLLKVLPAVVALLQPRAH
LLALIKPQFEAGRDEVGKGGIVKDASIHRKVIEKVTAGIEEAGFVSKGCIESPLKGAVGG
NTEFLALFERTSAQSGNE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccccaagaagaggagactggacgaggtctgcttggagcagtacccagaacac
agccgcagcgttatccagtcctggatagcgcagggcaaggtggccatcaatggaagagtc
atcacaaaggctggcacgccagtggcctccacgtccactgttgacatcactgccgtggcc
cccaaatttgtgtgcagcagggcagggctgaagctggaaggggcgctggatcattttggg
ctggatgtgtcggggatgagggtgctggacgccggtctatccaccggaggcttcacggac
tgcctgctgcagaggggcgcgacacatgtcattggggtagacgtggggtatggacaggtg
gcggagagggtgcggacggacgcgcgagtgacggtgatggagcgcacgaatctgcgctac
gtgcagctgggggatctgcctgaggcgctgccggtggatttggcgacgctggacctgtca
ttcatatcgctgctcaaggttctgccggccgttgtggcgctgctgcagccgcgcgcacac
ctgctcgccctcatcaagccccagttcgaggccggccgcgacgaggtggggaagggcggc
attgtgaaggatgcgagcatacacagaaaggtgatcgagaaggtcacagctggcatcgaa
gaggcgggttttgtgtccaaggggtgcattgagtctccgctaaaaggcgcagtgggaggc
aatacagagtttctggccctgtttgagaggacttcagcacaatctggcaatgaatga
DBGET
integrated database retrieval system