Coccomyxa subellipsoidea: COCSUDRAFT_38432
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Entry
COCSUDRAFT_38432 CDS
T02914
Name
(RefSeq) tRNA uridine 5-carboxymethylaminomethyl modification enzyme
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_38432
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_38432
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
COCSUDRAFT_38432
Prokaryotic type
COCSUDRAFT_38432
Chromosome and associated proteins [BR:
csl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
COCSUDRAFT_38432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
DUF1214
DAO
AlaDh_PNT_C
Pyr_redox
Pyr_redox_3
ThiF
HI0933_like
Thi4
Motif
Other DBs
NCBI-GeneID:
17036809
NCBI-ProteinID:
XP_005643403
JGI:
38432
UniProt:
I0YKE0
LinkDB
All DBs
AA seq
682 aa
AA seq
DB search
MVFISSTAPAAGTLQFSNWLPVCNGPFYLVLRLYGPSKFAQDEYDVVIVGAGHAGCEAAL
ASARLGSKTLLLTLNLDRIAWQPCNPAVGGPAKSQLVHEVDALGGEMGKMADRTYLQKRI
LNRSKGPAVWALRAQTDKLEYAREMRRLLERTPNLDIREGMAVDIQLGPNDEVTGVRTYF
GITFRCRAAVITTGTFMNGRIWVGRTSMPAGRAGEAPSTGLTEALVGLGFETDRLKTGTP
ARVDSRTVDYSGLEAQPGDPDVRWFSFDSSVHVEREQMSCYLTRTTAETHAIIRDNLAET
PVYGGWVDSAGPRYCPSIEDKIVRFADKDSHQVFLEPEGRDTPELYVQGFSTGLPERLQL
ALLRTLPGLERCRMLRPAYAVEYDYLPAHQCNASLETKRFSGLFFSGQLNGTTGYEEAAA
QGLVAGMNAARRAQGLEVVTLPRNSSYIGTLVDDLVTKDLREPYRMLTSRSEYRLLLRSD
NADRRLTPMGRQLGLVDDARWRMFQDKQAAIDVEKERLAAVRVREDSSLAQAAAEISGQQ
VPSIASLEELLRRPHVHYPLLERHGQGGAEGLSLAEKEAAEIDIKYAGFVRRQERQLAQM
EQRQSLQLPADLDYHAITTLRMEAREKLAKIRPRDIGQATRIGGVNPADIDSLLIYLEVQ
RRQRSAPPLSARQRREAHAVPT
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcatctcttcaacagcccctgcagccggcacactgcagttctccaactggctg
cctgtgtgcaacggcccattctaccttgtgcttcgcctgtatggcccctccaaatttgcc
caggacgagtatgatgtggtcatagtgggtgccgggcatgctgggtgcgaggcagcgctg
gctagtgccaggctgggcagcaagacactcttgctcaccctcaacctggacaggatcgcc
tggcagccgtgcaatccggcagtaggcggcccggccaagtctcaactggtgcatgaggtg
gacgcgctgggtggggagatggggaagatggccgaccggacatacctgcagaagcgcatc
ctcaaccgctcaaaggggccggcggtgtgggcgctgcgcgcgcagacagacaagttggag
tatgcgcgtgagatgcggcggctgctggagcgcactcccaacctggacatccgtgagggc
atggccgtcgacatccagctcgggccaaacgacgaggtgacgggtgtgcggacgtatttt
ggcatcacgttccggtgccgcgcggccgtcatcacgaccggcacattcatgaacggccgc
atctgggtcggccgcacctccatgcccgccggcagggccggggaggcgccgtcgacgggt
ctcacagaggcgttggtgggcctgggatttgagacagaccggctcaagacggggacgccg
gcgcgcgtggacagccgcacagttgactactccggcctcgaggcgcagccgggcgacccc
gacgtgcgctggttcagcttcgactcctcggtgcatgtggagcgggagcagatgagctgt
tacttaactcgaacgacggcggagacgcatgctatcatacgggacaacctggcggagacg
cccgtatacggggggtgggtggacagcgcggggccgcgatactgcccctccatcgaggac
aagatcgtgcgcttcgccgacaaggactcccaccaggtgtttttggagccggaggggcgc
gacacgccggagctgtatgtgcagggcttctcaacggggctgcccgagcgcctgcagctc
gccctcctgcgcaccctgccaggcttggagcggtgtcgcatgctgcggccggcatacgcg
gtggagtacgattacctgccagcacaccagtgcaacgcatcactggaaaccaagcgcttc
tccgggctcttcttctctgggcagctcaacggtaccaccggctacgaggaagctgccgca
caagggttggtggctggcatgaatgctgccaggcgcgctcaggggttggaggtggtgact
ctgccgcgcaacagcagctacatcggcacactcgtggacgaccttgtcaccaaggatttg
agggagccgtaccgcatgctcacaagccgctcggagtaccggctgctgctgcgatcggac
aacgctgacaggcggctgacgccgatgggtcgccagctgggcctcgtggacgacgccagg
tggcgcatgttccaggataagcaggcggcaattgatgtcgagaaagagcggctggcggct
gtgcgggtgcgcgaggacagctctctggcgcaggcggcagcagaaatatctgggcagcag
gtgcccagcatcgcctcactggaggagctgctgcgacggccccacgtgcactacccgctg
ctggagaggcatgggcagggaggtgcagagggcttgagcctggcagagaaggaggcggcg
gagatcgacataaagtacgccggctttgttcgtcggcaggagcggcagctggcgcagatg
gagcagcggcagtcgctgcagctgcctgctgacctggactaccacgccataaccaccctg
cgcatggaagcccgtgagaagctggccaagatccggcctagagacattgggcaggcgacg
cggataggtggagtgaatcccgcagacattgacagcctgctcatatacctggaggttcag
cggcgacagcgctcggccccgcctttgtcagccaggcaacgccgcgaggcgcatgccgtg
ccaacgtga
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