Coccomyxa subellipsoidea: COCSUDRAFT_42402 Help Entry COCSUDRAFT_42402  CDS       T02914                                  Name (RefSeq) HIT-like protein   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism csl  Coccomyxa subellipsoidea Pathway csl03410   Base excision repair Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     COCSUDRAFT_42402  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:csl03400]     COCSUDRAFT_42402 Enzymes [BR:csl01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      COCSUDRAFT_42402     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      COCSUDRAFT_42402     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      COCSUDRAFT_42402 DNA repair and recombination proteins [BR:csl03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      COCSUDRAFT_42402   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      COCSUDRAFT_42402 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DcpS_C AAA_33 HIT KTI12 AAA_18 Zeta_toxin AAA_22 AAA_5 AAA_16 CPT AAA nSTAND3 RNA_helicase AAA_17 AAA_28 ABC_tran AAA_PrkA AAA_24 Mg_chelatase NACHT PPV_E1_C ATP_bind_1 AAA_29 VapE-like_dom RsgA_GTPase ATPase Motif Other DBs NCBI-GeneID:  17040770 NCBI-ProteinID:  XP_005647327 JGI:  42402 UniProt:  I0YWL4 LinkDB All DBs AA seq 556 aa AA seqDB search MAAGRRRLPLWARSLAAVGNSRLQAMAQDWSQQQSLLASMHLHPHEGQRDSQIKTEPSRE GAVARENDVSLLPREGSALSTQALNAADREEDKPATLESLAKARSTAPSMASQGQSAKVA DLVRMWQRQPMTVHSLPQQRSVSRVGSSGLEQGRGRAAGAPSRGYMSPLVLSKVQSYLDT AASPSGMQGTPDRGAAGVRSVLNTARSMTAAEQPDAGISHAHPNGAPQAAVLILVGPPGS GKSTFAEELKQRAPGHWQRINQDTIGGGSKKGTRQQCAAAARKALDKGSSCVIDRCNFDA AQRKDFVALAQDAGCHAHAVVLQLPAALCAARAAQRVDHEGGLQGASAKSVVYRMASQMT SAGLPNATTEGLSSVMVCRTEGDVKRALNAWGAYGRSSERPIDAFNKGLPRKHTLHDLYR DEKPEMRVNEHCVLIHDAFPKAHHHALVLPRCAELHDMTSLRAEHVALLNHMEAVAQEWI SQHESKAGYLLGFHAIPSMSHLHLHVISKDFDSPRLKHKKHWNSFTTPFFMQLRDVRAQL LSQGKLLFYMELENAY NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt atggcggcaggcaggaggcggctgcccctgtgggcgcgcagcctggcagcggtgggcaac agccggctgcaggcgatggcgcaggactggagccagcagcagagcttgctcgccagcatg cacctgcacccgcacgaggggcagcgagacagtcagatcaagacagaacccagccgagag ggagcagttgcaagggagaatgatgtcagcctgctcccacgcgagggatctgcgctgtca acacaggcgctcaatgcagcagacagggaggaagacaagccagccaccctggagagcttg gccaaagcaaggtcgacagccccaagcatggcatcccagggccaaagcgccaaagtggct gacctggtgcgcatgtggcagcgccagccaatgacagtgcactctctgccccagcagcgc tctgtttcacgtgtgggcagctctggcctggagcaggggcgaggcagggctgccggcgca cccagccggggatacatgagccccctggtactgtccaaggtgcagagctacctggacaca gctgccagcccctctggcatgcagggcacaccagacagaggtgcagcgggtgtacgatca gtgctgaacactgctaggagcatgactgctgcagagcagcctgacgccggtatttctcat gcacaccccaatggagctccacaggcagcagtgctgatcctggtaggcccacctggctct ggcaagagcacatttgcagaggagctgaagcagagggcaccgggacactggcagcgcatc aaccaggacacgataggcggtgggagcaaaaaggggacccggcagcaatgcgcagccgct gctcgcaaggctctggacaaaggcagcagctgcgttatagaccggtgcaactttgatgct gcccagcggaaagattttgtcgcgctggctcaggacgccggctgccatgcgcatgcagtg gtgctgcagctgccagcggccctgtgtgcagcgagggcagcccagcgcgtggatcatgag ggcggcctgcagggggcttctgccaagagcgtcgtctacaggatggcttcccagatgacc tccgccggactgcccaacgccaccacagaggggctgtcatctgtcatggtgtgcaggacg gagggtgatgtcaagcgggcgctgaatgcgtggggcgcatatgggaggtcctctgagcgg ccgatcgacgccttcaacaaggggttgccgcgcaagcacaccctgcacgacctgtatcgg gatgagaaaccggaaatgcgcgtaaacgagcattgcgtgctcatacatgatgcattcccc aaggcgcaccatcatgcgctggtgctgcctcggtgcgcagaacttcacgacatgaccagc cttagagcagagcacgtggcgctcctgaaccacatggaggctgtggcacaggagtggata tcgcaacatgagagcaaagcaggctatctactgggctttcatgccataccctccatgagc cacctacatctgcatgtcatcagcaaggactttgactcgccaaggttgaagcacaaaaag cactggaactcgttcacgacaccattcttcatgcagctgcgcgatgttcgagcacagctc ctgtcgcaaggcaagctactattttacatggaacttgagaacgcctattga

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