Coccomyxa subellipsoidea: COCSUDRAFT_47893
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Entry
COCSUDRAFT_47893 CDS
T02914
Name
(RefSeq) glycoside hydrolase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00500
Starch and sucrose metabolism
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
COCSUDRAFT_47893
Enzymes [BR:
csl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
COCSUDRAFT_47893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Alpha-amylase
VWA_2
Alpha-amyl_C2
ACT
VWA_3
VWA_CoxE
ACT_6
ACT_4
Motif
Other DBs
NCBI-GeneID:
17040438
NCBI-ProteinID:
XP_005646996
JGI:
47893
UniProt:
I0YVN3
LinkDB
All DBs
AA seq
938 aa
AA seq
DB search
MAGLPLSFTTSVTTCNVRCASQTNRKTSSSQFIGDRCACLQLLGKPNLEQKFVFLHASLA
QSRLGKGPTYLEGHRWSLAATSFDVAASMDFGSGLFIDFDNNTDPDATVVTITGPDQHNL
LLRLTAALNSMGLNVVSASISSSDDGTVLDVFRVTNSEDQKVPEDSWDGVRESVLEMLAA
SSSRSSKPAIFGAAPAPEEQQRRPLGSAREGDAVALEVAAAEMAQAAANLVAIERSIVAL
TEKGGDAQALAAKETERAEAAAQLERRMSAMEAVLVARRTPVAEAKPEAARGPGADLRFQ
AGGATASGPALGNGYEIILQGFNWESHRQQWYQVLKDQAGFMASAGITSVWLPPPSDSVS
PQGYLPRDLYSLNSAYGSEAELRECLHVLHDCNLKAIADIVINHRCAHFQDEKGRWNKYG
GRLPWGTEAICNNNAVFGGTGNHKTGEDYTAAPNIDHTQEFVRQDIIKWLKLLRSIGFDG
FRFDFVKGYSGEFVKEYLDATVPELAFGEYWDTCEYTDGVLNYNQDAHRQRTVNWCDRTG
GTSAAFDFTTKGILQEAMGRGEYWRLIDSQGRPPGLLGMWPSRAVTFIENHDTGSTLNHW
PFPSSHLLEGYAYIITHPGSPCIFYDHFFAEGLGQGIREMIKIRSRLGIQCRSKVLILKA
AGDVYAASIDSKIAMKVGPGDWSPGAANLQEAPSRWQSLCEARWGPLTDLQYAAEALAGS
WKKLYRSKTETDKKAEQAQNLCPYEVDAFVQRLGCCAAPAGRTTIATFCVDGSGSMASED
FKVMTSFIATAMTGLLAMDINCKVAVVQFSNDVRVEIAPRHLPLDELKRQLDEMTRMNGG
TNIALAIKQAGQMLKCEDADAARIIILLTDGRVDTFQGREAVKMAERLADEQANVSIFAL
GVGRGVEKTEMQKIIGVCGADKVAARYIPLYTLDEAPW
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcagggctgcccttgtctttcacaacaagcgtgaccacttgtaacgtcaggtgtgca
agtcaaacgaacaggaagacttcatcaagccaatttattggtgatcgttgtgcgtgtctt
cagctgcttggaaaaccaaatttggagcagaagttcgtatttcttcatgcatctctagcc
caatcaaggttagggaaaggacctacatatcttgaggggcataggtggtcgctggcagct
acgtccttcgacgtggctgcatcaatggactttggcagcggcttattcattgactttgac
aacaatactgacccagacgccacagtcgtcaccatcacgggcccagaccagcacaacctg
ctgctgcgcctcacagcggcgctcaacagcatggggctgaatgtggtgtctgctagcata
tcctcatcagatgatgggaccgtgctagatgtcttccgagtcaccaacagcgaggaccag
aaggtgccagaggacagctgggatggggtgagggagtcagtgctagagatgttggcggcc
tccagcagccgctcctcaaagccggccatctttggagccgcgccggcgccggaggagcag
cagcggcggccgctggggtcggccagggaaggggacgccgtcgcgctggaagtcgctgct
gcagagatggcgcaggccgccgccaacctggtcgccatcgagcgcagcattgtggcgctc
accgagaaggggggggatgcacaggcgctggcggccaaggagacggagcgggcggaggcg
gctgcgcaattggaacgacggatgtcggccatggaagctgtcctggttgcgcgcagaacg
cctgtggcggaggccaagcctgaggccgcccgggggcctggagcagacctccgcttccag
gctggtggagctactgcatccgggccggctcttggcaatggctatgagatcatcctgcag
ggcttcaactgggagtcacacaggcaacagtggtaccaggtgctgaaggatcaggcgggc
ttcatggcgagtgcaggcatcacgagcgtgtggctgccgccgcccagcgacagtgtgagc
ccgcaggggtacctgccgcgcgacctgtacagcctcaacagcgcatatggcagtgaggca
gagctgcgcgagtgcctgcacgtgctgcacgactgcaacctcaaagccatcgctgacatc
gtcatcaaccaccgctgcgcgcatttccaggacgaaaaagggaggtggaacaagtatggg
ggcaggttgccgtggggcacggaggccatctgtaacaacaacgcggtcttcggcggcacg
gggaaccacaaaaccggggaggactacacggccgcgcccaacattgaccacacgcaggag
tttgtgcgccaggacatcatcaaatggctcaagctcctgcgctccatcggctttgacggc
ttccgctttgacttcgtcaagggctacagcggggagtttgtgaaggagtacctggatgcc
acggtgccggagctggcgtttggcgagtactgggacacttgcgagtacacagacggcgtg
ctcaactacaaccaggacgcccaccggcagcgcaccgtcaactggtgtgaccgcaccggc
ggcacctcagcggcattcgacttcacgacaaagggcatcctgcaggaggcgatggggcgg
ggggagtactggcgactgattgacagccaggggcgtccgccaggcctgctgggcatgtgg
ccctcgcgagcggtgacgttcatagagaaccacgacacgggctccacgctcaatcactgg
cccttccccagctcgcacctgctggaggggtatgcctacatcatcacccaccccggctcc
ccctgcatcttctatgaccacttcttcgccgagggcctgggccagggcatccgcgagatg
atcaagatccgctcccgcctcggcatccagtgccgatccaaggtgctgatcctgaaggca
gccggggatgtgtatgcagcgagcattgacagcaagatagcaatgaaggtgggcccagga
gattggtcccctggagcggccaacctgcaggaagcaccctctaggtggcagagcctctgc
gaggcgcgctggggcccgctcacagacctacagtatgcagcagaagcgctggctgggtca
tggaagaagctgtacaggagcaagactgagacagacaagaaggcagagcaggcgcagaat
ctgtgcccctatgaggtggatgcatttgtgcagcgcctgggctgctgcgccgcgcctgca
gggcgaacaacgattgccaccttctgcgtagacggcagcggatccatggcctctgaggac
ttcaaagtcatgaccagcttcatcgcgactgccatgactggcctgctggccatggacatc
aactgcaaggttgcagtagtgcagttcagcaatgacgtgcgagtggagattgcgccacgg
cacctgccgctggatgagctgaagaggcaactggatgaaatgacgcgcatgaatggaggc
acgaacatcgccctggcaatcaagcaggctgggcagatgctcaagtgcgaggatgcagac
gcagcgcgcatcatcatcctgctcacagatgggcgcgtagacaccttccaggggcgcgag
gcagtgaagatggcagagcgtttggcggacgagcaggcaaacgtgtccatctttgctctg
ggcgtcgggcggggcgtggagaagacagagatgcagaagatcatcggcgtctgcggtgct
gacaaggtggctgcgcgctacatccccctgtacaccctggacgaggccccctggtga
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