KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_53432
Entry
COCSUDRAFT_53432  CDS       T02914                                 
Name
(RefSeq) 54-kd signal recognition particle specific protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03060  Protein export
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    COCSUDRAFT_53432
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:csl02044]
    COCSUDRAFT_53432
Enzymes [BR:csl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     COCSUDRAFT_53432
Secretion system [BR:csl02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   COCSUDRAFT_53432
  Eukaryotic Sec-SRP protein
   COCSUDRAFT_53432
SSDB
Motif
Pfam: SRP54 SRP54_N SRP_SPB cobW AAA_33 AAA_22 AAA_19 MMR_HSR1 Zeta_toxin ResIII AAA_30 nSTAND3 DDE_Tnp_1_3 AAA_17 DO-GTPase2 DUF2209 AAA_16 CbiA vWA-TerF-like Dynamin_N ATP_bind_1 Spectrin_SESTD1
Other DBs
NCBI-GeneID: 17041683
NCBI-ProteinID: XP_005648235
JGI: 53432
UniProt: I0YZ72
LinkDB
AA seq 485 aa
MVLNELGQKISQALSMIQNAESIDEKVLDACLKEIVTALLQADVNVRLVGKLRDNVKTRA
NNADKGAGLNKRKIIEKAVVDELSSMLSSGVDEKKLVDLKKGQPNVIMFVGLQGAGKTTT
CTKYGAYYKKKGFKPALVCADTFRAGAFDQLKQNATKMQIPFYGSYTETDPAVIAAKGVE
EFKKANHDLIIVDTSGRHKQEDSLFEEMRQVSVMTKPDLIIFVMDGSIGQAAEDQAKAFK
DTVEVGAVILTKMDGHAKGGGALSAVAATKSPIVFIGTGEHMDEFERFEPNAFVGRLLGR
GDWRGFVDKISEAVPEDAMKEELMDSLSKGNFTMRILYEQLANIQKMGPVGQGKEKESAA
RIKMFMTIMDSMTDKELDCPNPKVLQEQSRVMRVARGAGCNPYCVLELLEEYKRIRALIM
GPGGKGKGFMQQMSKQMGNSRGAMNPHNMQMNIQQMSRMLPPQVLKQMGGAGALQGLLKQ
MEGMK
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggtgctcaacgaacttggtcagaagatcagccaagcgctgtctatgatacagaatgca
gaaagcatcgacgaaaaggtgctggatgcatgcctgaaggaaatcgtgacagcgctgctg
caagctgatgtgaatgtacggctcgtggggaagctacgagacaatgtgaagacgcgcgcg
aacaatgctgacaagggcgctgggctgaacaagcgcaagatcatcgagaaggcggtggtg
gatgagctctccagcatgctcagcagcggcgtggatgagaagaagctggtggacctgaaa
aagggccagcccaatgtcatcatgtttgtgggcctccagggtgctggtaagacgacaacg
tgtacaaagtacggcgcgtattacaagaagaaggggttcaagcctgcgctagtctgtgca
gataccttcagggcaggtgccttcgaccagctcaaacagaacgccacaaagatgcagatc
ccgttctatgggtcctacacagagacggaccctgcagtgatcgctgccaagggagtggag
gagttcaaaaaggccaaccacgacctcatcatcgtggatacgtctgggcggcacaagcag
gaggactcgctgtttgaggaaatgcggcaggtgtcagtgatgacaaagcctgacctcatc
atctttgtcatggacggcagcattgggcaggctgcggaggaccaggccaaggccttcaag
gacactgtggaggtgggagctgtgatcctgacaaagatggatgggcatgccaagggaggt
ggggcgctatcggcggtggcggccaccaagtcgcccattgtgttcatcggaacgggagag
cacatggatgagttcgagcgctttgagcccaatgcctttgtcggacggctgcttggccga
ggcgactggcgcggcttcgtcgacaagatctcggaggcggtgccggaggacgcgatgaag
gaggagttgatggacagcctgagcaagggcaacttcacaatgcgcatcctgtacgagcag
ctggcaaacatccagaagatgggccctgttggccagggcaaggagaaggagagtgcggcg
cgcataaagatgttcatgacgataatggacagcatgacggacaaggagctggattgcccc
aaccccaaggtgctgcaggagcaatcgcgagtcatgcgcgtcgcccgcggcgccggctgc
aacccctactgcgtcctcgagctgcttgaggagtacaagcggatacgggcactcataatg
ggtcccggcggcaagggcaagggcttcatgcagcagatgagcaagcagatggggaacagc
cgcggcgccatgaacccccacaacatgcagatgaacatccagcagatgtcgcgcatgctg
ccaccccaggtgctgaagcagatgggaggtgctggagcgctgcaggggctgctcaagcag
atggagggcatgaagtga

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