Ceratosolen solmsi marchali (fig wasp): 105366960
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Entry
105366960 CDS
T06056
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03013
Nucleocytoplasmic transport
csol03015
mRNA surveillance pathway
csol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105366960
09122 Translation
03013 Nucleocytoplasmic transport
105366960
03015 mRNA surveillance pathway
105366960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105366960
03041 Spliceosome [BR:
csol03041
]
105366960
03009 Ribosome biogenesis [BR:
csol03009
]
105366960
03012 Translation factors [BR:
csol03012
]
105366960
Enzymes [BR:
csol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105366960
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105366960
mRNA cycle factors
Stress granule specific factors
105366960
Spliceosome [BR:
csol03041
]
Complex C
Other components
EJC/TREX
105366960
Ribosome biogenesis [BR:
csol03009
]
Eukaryotic type
90S particles
Helicases
105366960
Translation factors [BR:
csol03012
]
Eukaryotic type
Initiation factors
eIF-4
105366960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
AAA_22
AAA_30
UvrD-helicase
TniB
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
105366960
NCBI-ProteinID:
XP_011503878
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MAEGKSRRIAAAQNEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQ
RSIKPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQLRETQVLVLSPTRELATQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVL
DESDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCS
MHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVSINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaaagtcacgacgtattgctgctgcacaaaatgaagatttatcaaatgtt
gaattcgaaactagtgaagatgtcgaggttattccgaccttcgacaacatgggccttaga
gatgagttgcttcgaggaatttacgcttacggttttgaaaagccctcggctattcaacag
cgctcgatcaaaccaataatgaaaggtagagatgttattgcccaagctcaatctggtacc
ggaaaaacggcaacattttcaattgcaattttacaatctctcgatactcaattacgtgaa
acacaggttctcgtactttcacctacaagagaacttgccactcagattcaaaaagttatt
ctagctctgggagatttcatgaatgttcaatgtcatgcatgtattggtggtacaaattta
ggtgaagatatcagaaaacttgactatggacagcatgttgtttctggaacacctggaaga
gtattcgatatgatcaaaagaagagtcttacgtactagggcaatcaagatgttggttctt
gatgaatctgatgagatgttgaataaaggttttaaagaacaaatttatgatgtttatcgt
taccttccaccagcaacccaggtagtactggtatcggctacattacctcatgaaattcta
gaaatgactagtaaatttatgactgatcccattagaattcttgttaaacgtgatgagctg
acacttgaaggtataaagcaattttttgttgctgttgaacgtgaagaatggaagtttgat
actctctgtgatttatatgatacattaacaattacacaagcagttatattttgtaataca
aaacgaaaagttgattggttaacagaaaaaatgagagaagctaattttactgtatgttca
atgcatggagatatgccacaaaaagagagagataatataatgaaggagtttagatctgga
caaagtcgtgtgttgataactacagatgtctgggctagaggaatagatgtacagcaagtg
tctcttgttattaattatgatttaccaaataatcgtgagttatacattcatagaataggt
cgttctggacgttttggaagaaaaggtgtttctattaactttgtaaaaaatgacgatatt
aggattcttcgagatattgaacaatattattctactcaaatagacgaaatgcctatgaat
gtagccgatttaatataa
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