Cetobacterium somerae: MKD34_08230
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Entry
MKD34_08230 CDS
T08261
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csom
Cetobacterium somerae
Pathway
csom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MKD34_08230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csom03021
]
MKD34_08230
03400 DNA repair and recombination proteins [BR:
csom03400
]
MKD34_08230
Enzymes [BR:
csom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MKD34_08230
Transcription machinery [BR:
csom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MKD34_08230
DNA repair and recombination proteins [BR:
csom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MKD34_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UPO97120
LinkDB
All DBs
Position
complement(1762811..1763788)
Genome browser
AA seq
325 aa
AA seq
DB search
MLKIEKHAKGINITELKTSDFSGQYVIEPLYRGYGHTIGNALRRVLLSSIPGAAVKGVRI
DGVLSEFSVMEGVKEAVTEIMLNVKEVVIKAETAGERKMTLSAKGPKTVTAADIIPDIGL
EIVNPDQIICTLTTDREIDMEFIVDTGEGFVVAEEIEKKDWAVDFIAVDAIYTPIRKVSY
SVQDTMVGRMTDFDKLTLNIETDGSVEIRDAISYAIELLKYHLDPFLDLGNRMDHLRVDL
EEEEETPTSTAKADDVLNTRIEELDLTVRSFNCLKKAGIEEVGQLARMSMNELLKIKNLG
RKSLDEILEKMKELGFDLNGNGSVE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatagaaaaacatgctaagggtattaacattaccgaattaaaaacaagtgac
ttttctggtcaatatgttatagaacctttatatagaggatatggacatacaattggtaat
gctttgagaagagttttactatcatctatacctggtgctgccgttaaaggtgttagaatc
gacggagtactaagcgagttttcagttatggaaggtgttaaagaggctgtaactgaaata
atgctaaatgtaaaagaggtagtaataaaggcagaaactgctggagaaagaaaaatgact
ctttctgcaaagggacctaagactgttacagctgctgatataataccagatatcggatta
gagattgtaaatcctgatcaaattatttgtacattaactacagatagagagatagatatg
gaattcatagttgatactggtgaaggatttgttgttgctgaagagatagagaagaaagat
tgggctgtagactttatagcagttgatgctatatatacaccaattagaaaagtatcttac
tcagttcaggatacaatggttggaagaatgactgatttcgataagttaactttaaacata
gaaacagacggaagtgttgagataagagatgctatttcttatgcaatagagcttctaaag
tatcatttagatccgttccttgacttaggaaatagaatggatcacttaagagtagatctt
gaggaagaggaggaaactcctacatcaactgctaaggctgatgatgtattaaatacaaga
atagaagagctagatttaacagttagatcatttaactgtttaaagaaagctggaatagaa
gaagttggacagttggcgagaatgtcaatgaacgaacttctaaaaataaagaatctagga
agaaaatcactagatgagatccttgaaaaaatgaaagaacttgggttcgatctaaatgga
aacggatctgtagaataa
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