Entry |
|
Symbol |
holA
|
Name |
(GenBank) DNA polymerase III, delta subunit
|
KO |
|
Organism |
cspf Campylobacter sputorum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cspf00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSF_0432 (holA)
03430 Mismatch repair
CSF_0432 (holA)
03440 Homologous recombination
CSF_0432 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cspf03032]
CSF_0432 (holA)
03400 DNA repair and recombination proteins [BR:cspf03400]
CSF_0432 (holA)
Enzymes [BR:cspf01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSF_0432 (holA)
DNA replication proteins [BR:cspf03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSF_0432 (holA)
DNA repair and recombination proteins [BR:cspf03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSF_0432 (holA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
439720..440712
|
AA seq |
330 aa
MYKKEFETLLNSSKFPNYFLVFGSDDYQIDEYSAEILELYGKDESTQIYYDEYDFNVAKS
VLLEPNLFSSNSVLHIKRDSKIPKKELEVLVNACKKNSDCKFLFEFYEGDMKIALESTKV
FGQNFVRFFAPSNPNEAVSLLAKKAQKLHLDITTSALYQIYSIHNENLYLSATELNKLSN
LGKKIDEQMVKDLVFGLSPVSFDEIFNKLIELKDFKDDFFLCFESANFNEISFLNSIYLS
LFRLFKIHSYVKSNGTFDIKAAIGYAPPPNIAKFLQTQALKLSLNTFKELFMFLNGVEFE
LKTDSNLEKKYFLLSSLIKFQEIIYINSKN |
NT seq |
993 nt +upstreamnt +downstreamnt
atgtataaaaaagaattcgaaactctcttaaactcttcaaaatttccaaactatttttta
gtttttggtagtgatgattatcaaatagatgagtatagtgcagaaattttagaattatat
ggcaaagatgaaagtacgcaaatttactatgacgaatatgattttaatgtggcaaaatct
gttcttttagagccaaatttatttagttcaaattctgttttgcatataaaaagagatagc
aaaataccaaaaaaagagcttgaagttttggtaaatgcttgcaaaaaaaatagtgattgt
aaatttttatttgagttttatgagggcgatatgaaaatcgcacttgaaagcacaaaggtt
tttggtcaaaattttgttagattttttgcacctagcaacccaaatgaagctgtgtctttg
cttgcaaaaaaagcccaaaaacttcatcttgatataacaacttcggcactttatcaaatt
tatagtatccataatgaaaatttatatcttagtgcaacagagctaaataaattatcaaat
ttaggaaaaaagatagacgaacagatggttaaggatttagtttttggtttaagtcctgta
agttttgatgaaatttttaataaattaatagagttaaaagattttaaagatgactttttt
ttatgctttgagagtgcaaattttaatgaaatatcgtttttaaattctatttatctttct
ctttttagactttttaaaatacattcttatgtaaaaagcaatggaacttttgatataaaa
gctgctattggttacgcaccccctccgaatatagctaaatttttacaaacacaggcttta
aaattaagcttaaatacattcaaagaactttttatgtttttaaatggtgtagaattcgaa
ctaaaaactgattcaaatttagaaaaaaaatattttcttttatcttctttgattaagttt
caagagataatttatataaacagcaaaaattaa |