Cytobacillus spongiae: LS684_07170
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Entry
LS684_07170 CDS
T09119
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
cspg
Cytobacillus spongiae
Pathway
cspg00190
Oxidative phosphorylation
cspg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LS684_07170
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LS684_07170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cspg03019
]
LS684_07170
Enzymes [BR:
cspg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LS684_07170
Messenger RNA biogenesis [BR:
cspg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LS684_07170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
UII57215
LinkDB
All DBs
Position
1400944..1403055
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AA seq
703 aa
AA seq
DB search
MDKVSAKIDFSLPSYYNNRELSWLAFNERVLEEALDKRNPLLERLKFLAIFSSNLDEFFM
VRVAGLKDQVKAGFNKPENKAGMTPKRQIAEISKKAHELVDIQCDTLKNVILPSLETEHV
FLRNLNKLDDTQLSFLEQYFEDQIFPVLTPMAIDAYRPFPMLLNKSLNIAVKIEGDMDAD
GETKRLAIVQVPAGVLDRFIELPSIAPQSCYVLLEDIICYFIEKLFNGFNVLSVTQFRIT
RNADLTIHEEGARDLLLEIEKELKKRKWGAAVRLEIRDEGFDEDVFEYLLDELEITENDT
YRISGPLDLTFLFSFYKTLSKKREDLVYQVFIPQPPIDMDLDEDLFSTALKEDLFFHHPF
ESFQPVIDFVSEAADDPNVLAIKQTLYRVSGDSPVIEALKRAAENGKQVTVLVELKARFD
EENNVQWAKELEKAGCHVIYGMTHLKTHSKITLVVRRKHGKIERFVHLGTGNYNDQTAKI
YTDMGYITSKRKFGIDATNFFNYLSGFTKKPEYHHLVVAPFDIRGEFIRLVDEEISYHKK
YGNGHIIAKMNSLTDKELIMKLYEASSAGVKIELIVRGICCLRPGIPKVSENIRVISIVG
RFLEHSRIYYFHHNGEEKIYLSSADLMTRNMEKRVEILFPIFEASLKKRLKHVFHLQLND
NQKAREQDANGIYSYVTDGVKDLSISSQNQLMAEAYTLREDEE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtggataaagtgagtgcaaagatagattttagccttccttcctattacaacaatcgcgaa
ttaagttggctcgcttttaatgaaagagtactagaagaggcgttagataaaagaaatcct
ttattagaacgcctaaagtttttggcgatatttagttcaaatttagatgaattttttatg
gtacgggttgcgggcttaaaagaccaagttaaggcaggctttaataagccggagaataaa
gcaggaatgacgccaaaacggcagatagcagaaatctcaaagaaagctcacgaactagtt
gatattcaatgtgacacattgaaaaatgtcatcttgccgagtctcgaaacagaacatgtt
tttttacgaaatcttaataagctagatgatacacagctttcttttctagaacaatatttt
gaggatcaaattttcccagttctaactccgatggctattgatgcctatcgtccatttccg
atgctgcttaacaaaagcttaaatatcgccgttaaaatagaaggggatatggatgcagat
ggggaaacaaagcggttagcaattgttcaggtcccagctggagttctggatcgttttatt
gagttaccatcaatcgctccccagtcatgttatgtactattagaagatatcatttgctac
tttatcgagaagttatttaacgggtttaatgtgttatccgtaactcaattccggattaca
agaaatgccgatttaaccattcatgaagaaggcgcacgtgatcttttattagaaatagaa
aaggaacttaagaagcgaaaatggggtgcggcagttaggcttgaaattcgcgatgaaggc
ttcgatgaagatgtattcgagtatttgctagatgagctggaaatcacagaaaatgatacg
tatcgtattagtggtcctttggacttaaccttcctcttttccttctataagacactttct
aagaagagagaagaccttgtataccaagtatttattccacagcctccaatagatatggat
ttagatgaggatctttttagtacggcattaaaggaggatctattcttccatcatccattt
gaatcatttcaacctgtaattgactttgtttctgaagctgcagatgatccgaatgtgtta
gctattaaacaaactctttatcgtgtaagtggtgattctccggtaattgaggcgttgaag
cgagcggctgaaaacggaaagcaggttaccgtcttagtcgaacttaaagctcgattcgat
gaagagaacaatgtccaatgggctaaagaattagaaaaagcaggctgccatgtaatttac
ggaatgacgcatttaaaaactcatagtaagattacactcgttgtaaggcgtaaacatggt
aaaattgagcgatttgttcatttaggtacaggaaattacaatgatcaaacagctaaaatt
tatacagatatgggatatattacgtcaaagcgaaaattcggaattgacgcaactaacttc
ttcaattatttaagcggattcactaaaaaacctgaatatcaccatttagttgtggctcca
ttcgatatacgaggagaatttattcgactcgtcgatgaagaaataagctatcataaaaaa
tatgggaatggccatatcattgccaaaatgaactcactaactgacaaagaattaatcatg
aagctttacgaagcttcaagtgcaggagtgaaaattgagttaatagttcgtgggatttgt
tgtttacgtccaggtataccaaaggtaagtgagaatattcgagtaattagcattgtaggt
agattcctagaacatagcagaatctattatttccatcataatggtgaagagaaaatctat
ttatcttctgcagacctcatgacgagaaatatggaaaaacgagtagagattcttttccct
atttttgaagcttcattaaagaagagattaaaacatgtgtttcatttacaactaaatgat
aatcaaaaagcacgggagcaagatgcaaatggaatttattcctatgtcactgatggtgta
aaagatctttctataagtagccaaaatcaattaatggcagaagcatatactttaagggaa
gatgaagaataa
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