Comamonas squillarum: N4T19_02065
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Entry
N4T19_02065 CDS
T10846
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
csqu Comamonas squillarum
Pathway
csqu02024
Quorum sensing
csqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N4T19_02065 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N4T19_02065 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csqu03019
]
N4T19_02065 (hfq)
03036 Chromosome and associated proteins [BR:
csqu03036
]
N4T19_02065 (hfq)
Messenger RNA biogenesis [BR:
csqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
N4T19_02065 (hfq)
Chromosome and associated proteins [BR:
csqu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
N4T19_02065 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
UXC18942
UniProt:
A0ABY5ZY74
LinkDB
All DBs
Position
452306..452557
Genome browser
AA seq
83 aa
AA seq
DB search
MSNKGQLLQDPFLNALRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STIVPGRAVNFSAPDSQDNEASA
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacaaaggccaacttctgcaagatcccttcctcaacgctctgcgccgcgagcat
gtgccagtgtccatctatttggtcaacggcatcaagctccaaggccagatcgaatctttt
gaccagtacgttgtgctgctgcgcaacaccgtcacccagatggtgtacaagcatgcgatc
tcgaccattgtccccggtcgtgccgtgaacttctcggcacctgactcgcaagacaacgaa
gcttcagcctaa
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