KEGG   Clostridium saccharoperbutylacetonicum: Cspa_c13550
Entry
Cspa_c13550       CDS       T02467                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
csr  Clostridium saccharoperbutylacetonicum
Pathway
csr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Cspa_c13550 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csr03019]
    Cspa_c13550 (rny)
Messenger RNA biogenesis [BR:csr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Cspa_c13550 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_PNO1_2nd HDOD KH_KhpA-B KH_NusA_2nd KH_2
Other DBs
NCBI-ProteinID: AGF55127
UniProt: M1MUA3
LinkDB
Position
1488407..1489948
AA seq 513 aa
MEIAGMILIDIVVLLVLGIVVYKTIQNTSKAKIESLEKEAKEVLDKAKKEAESTKKESIL
EAKEELHRLRNDFDKESRDRRNEIQRLERRVIQREEALDKKSELLEKKDETINERMLELD
QVEAQVQKLYDERRVELERVAALSTEEARGILLDEIRKEITHDAALMIKDIESKAKEEAE
KRAREIITTAIQRCAADHVSESTVHVVALPNDEMKGRIIGREGRNIRTLETLTGVDLIID
DTPEAVILSSFDPIRREVARMALEKLIVDGRIHPARIEEMVERATRDVENSIKEEGEQAA
LETSVHGLHPEIIRLLGRLKYRTSYGQNVLKHSIEVSYLAGLMASELGLDVTLAKRAGLL
HDIGKAVDQEQEGPHALIGGDLAKKYHESPLVINAIAAHHSDVEMQSLEAVLVQAADAIS
AARPGARRETLEAYIKRLEKLEEIANSHEGVEKSYAIQAGREIRIMVKPDKVDDAGTVEL
ARSLVKSVEEELEYPGQIKINVIRETRAVDFAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
gtggaaatagctggaatgatattaatagatattgttgttctattagtattgggaatagtg
gtttataaaacgattcaaaatacgtcaaaagcgaagattgaatcgcttgaaaaagaagca
aaggaagttttagataaagctaaaaaggaagcagaatcaactaaaaaagagtctatcctt
gaagcaaaagaagaacttcatagattaagaaatgattttgataaggagtctcgtgacaga
agaaatgagattcaaaggcttgaaagaagagtaattcaaagagaggaagctcttgataaa
aagagtgaacttcttgaaaagaaggacgaaacaatcaatgaaagaatgcttgagttagat
caagtagaagcacaggtacagaagctttatgatgaaagaagagtggaacttgaaagagta
gctgcactttcaacagaagaagcaagagggattcttttagatgagattaggaaagaaatc
acacatgatgctgccttaatgataaaagatattgaaagtaaggcaaaagaagaagcagag
aagagggcgcgtgaaataataacaactgcgatccaaagatgtgctgctgatcatgtgtca
gaatcaactgtacacgttgttgcactaccgaatgatgagatgaaaggtagaataataggt
agagaaggaagaaacattagaaccttggaaacattaacaggagtagatttaattattgat
gatactccagaagcagtcattctttctagctttgatccaattaggcgtgaagttgcaaga
atggcactagaaaagttaatagtggatggcagaatacatccagcaagaatcgaagagatg
gttgaaagagcaactagagacgtagaaaatagtataaaagaagaaggagagcaagcagct
cttgaaactagtgtacatggactacatccagaaattattagacttcttggtagattaaag
tatagaacaagttatgggcaaaatgttttaaaacattccatagaagtttcatacttagct
ggcttaatggcttcagagctaggtttagatgttactttagctaaaagagctggattacta
catgatattggtaaagctgttgaccaagagcaagagggacctcatgctttaattggtgga
gatttagctaaaaagtatcatgaatcaccattagtaattaatgcaatagcagcacatcat
tcagatgtagaaatgcaatctttagaagctgtactagttcaagcagcagatgcaatatca
gcagctagaccaggagctagaagagagacattagaagcatacattaagagattggaaaag
ttagaagaaattgcaaattcacatgaaggtgtagaaaagtcatatgccattcaagctggt
agagagattagaattatggttaaaccagataaagtagacgatgctggaacagttgaattg
gcacgtagtttagtaaagagtgtcgaggaagaacttgaatatccaggtcaaattaaaatt
aatgttataagagaaactagagcagtagattttgccaagtaa

DBGET integrated database retrieval system