Acetoanaerobium sticklandii: CLOST_2211
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Entry
CLOST_2211 CDS
T01334
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (Transcriptase subunit beta) (RNA polymerase subunit beta)
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cst
Acetoanaerobium sticklandii
Pathway
cst03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLOST_2211 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cst03021
]
CLOST_2211 (rpoB)
03400 DNA repair and recombination proteins [BR:
cst03400
]
CLOST_2211 (rpoB)
Enzymes [BR:
cst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLOST_2211 (rpoB)
Transcription machinery [BR:
cst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLOST_2211 (rpoB)
DNA repair and recombination proteins [BR:
cst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLOST_2211 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
CBH22331
UniProt:
E3PTX7
LinkDB
All DBs
Position
complement(2322881..2326552)
Genome browser
AA seq
1223 aa
AA seq
DB search
MSFSQITEVAELPNLIEIQLESYEWFLREGLREVFEEVFPIEDYTGNIKLEFLDYFIEET
PKYDVEESKERDVTYSAPLKVRVRLTVPDEDGSKIIKNESGEPVFLGDFPLMTDKGTFII
NGAERVIVSQLVRSPGVYFSQEMDKSGKRLISSTVIPNRGAWLEYETDSNDIVSVRIDRN
RKQPVTMLLRALGYGSDQEIRELLGDDERLEATILKDSSKSTDEGLIEIYKKLRPGEPPT
LESATSLINSMFFDHKRYDLAKVGRYKFNKKLALSNRIYSRVLSRDVVDPSTGEVVLTSG
IKLSVEQAKMLDDIGISHVYVYGEEEKEVKVIGNCFVDIKKHIAFSIDDLNIKEKVRYKV
LREILDNFSTEEEIKAQLIERKRELVPKHITEEDIIASISYQFNLFHSIGNIDDIDHLGN
RRVRSVGELLQNQFRIGLSRMERVIKERMTVQDAIDLTPNSLMNIRPVTAAIKEFFGSSQ
LSQFMDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHYSHYGRMCPIETPEGPNIG
LINSLSVYARINEYGFIESPYRRVDNENNKVTEIIDYLTADEEDLYIRVQANEPLSEDSW
FVNSKVASRTKMGTVELVPTELVDYVDVSPKQVVSVATAMIPFLENDDANRALMGSNMQR
QAVPLVRREAPIIGTAIEYRAAKDSGAVIVARHDGVVEKVSAKEIIIKREDGQKDRYRLL
KFKRSNQGTCINQTPLVNKGDVMKKGDVIADGPSTDLGEIALGRNCLVAFMTWEGYNYED
AILINERLVKEDRLSTIHIEEYEAEARDTKLGPEEITRDIPNVGDDAIKNLDERGIIRIG
AEVESGDILVGKVTPKGETEITPEERLLRAIFGEKAREVRDTSLRVPHGESGIIVDVRIF
TRENGDELSPGVNELVRCYIAKKRKINVGDKMAGRHGNKGVISRILPEEDMPFMPDGTPV
EIVLNPLGVPSRMNIGQVLEIHMGLAAKALGWHVATPVFDGAVEEDIFQALDKAGYPKSG
KIHLQDGRTGDYFDNPVTVGYMYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQ
RFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGIPESFKVLIK
ELQSLCLDVKVLTETDEEIEVRESIEEAALVDEFEYVAEDRDDMIEEVLTPEEDFNLEEE
GDDDIDFDSFISDTDEEDDEFDF
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttctcagataactgaagtcgcagaacttcccaatcttatagaaatccagctc
gaatcctatgaatggtttcttagagaagggcttagagaagtttttgaagaggtatttcct
atagaagactatacaggaaatattaagctggaatttcttgattactttattgaggaaact
ccaaagtacgatgtagaagaatcgaaagaaagagatgtaacttactcggcaccgctgaag
gtaagagtaaggcttactgttccagacgaagatggttctaagataattaaaaacgaatct
ggagaaccagtatttttaggtgattttcctcttatgacagataagggaacatttataatc
aacggagcagaaagagttattgtaagtcagttagtacgttctccaggtgtttatttttct
caagaaatggataaatcaggaaagagacttatttcttctactgtaattccaaacagagga
gcatggcttgagtacgaaactgattcaaacgatatagtttctgtaagaattgacagaaat
agaaaacaaccggtaactatgctactcagagcattaggctatggaagcgaccaggaaatt
agagaacttcttggtgatgacgaaagacttgaggctactattcttaaagatagctcaaag
tcaactgacgaaggcttaattgaaatttataaaaaattaagacctggtgaaccacctaca
ttagaaagtgcgacatcgttaataaactctatgttttttgatcacaagagatacgattta
gctaaagttggaagatataaattcaacaaaaaattagctttatctaacagaatctactct
agagtactatcgagagatgtggtagacccatctacaggagaagtagtacttacaagtgga
attaagcttagcgtagagcaagctaagatgttagatgatattggaatatctcatgtttat
gtctatggagaagaagaaaaagaagttaaggttataggtaactgttttgtagacattaaa
aagcatatagctttttctatcgacgatttaaatataaaagaaaaagtaagatataaggtt
ctaagagaaatcttagacaatttcagtacagaagaagaaataaaagctcagcttatcgaa
agaaaaagagagctagttccaaaacacataactgaggaagatataattgcatctatcagt
tatcagttcaatttattccattctataggtaatatagatgatatcgatcatctaggaaac
agaagagttcgttctgttggagaacttcttcagaatcaatttagaatcggtctgtctaga
atggagagagttatcaaggaaagaatgactgttcaagatgctatagaccttactcctaac
tcattaatgaacatcagaccagtaactgcagcaatcaaggagttttttggttcttctcag
ttatctcagttcatggaccaaacaaacccactttctgaacttacgcacaaacgtagactt
tctgctcttggaccaggtggtctatcaagagaaagagctggctttgaggtaagagacgta
cactattctcattacggaagaatgtgtcctatagagacaccagagggtccaaacatcgga
cttataaactcactttcggtgtatgcaagaatcaatgaatatggttttattgaatctcca
tatagaagagtagacaatgaaaataacaaagtaactgaaatcatagattatcttacagca
gatgaagaagatttatacatcagagttcaggcgaatgagcctctatctgaagatagctgg
tttgtaaactcaaaggttgcatctagaactaagatgggtacagttgaactagtgcctact
gagttggttgactacgttgacgtttcaccaaaacaggtagtttcagttgcaacggctatg
attcctttcttggaaaacgacgacgcaaaccgtgcccttatgggatcgaacatgcagcgt
caggcggtaccgctagttagaagagaagcacctattataggaactgctatagaatataga
gcagccaaggattctggtgcagttatcgtagcaaggcacgacggagtagtagaaaaagta
tcggcaaaagaaatcattataaaaagagaagacggacaaaaagatagatatcgtctgctt
aaattcaaacgttctaaccaaggtacttgtatcaatcaaacacctcttgtaaacaagggc
gatgttatgaaaaaaggtgacgttatagcagatggaccttctactgatttaggggaaatt
gctcttggcagaaactgcctagttgcattcatgacgtgggaaggttataactatgaggat
gctatcttaattaatgaaagacttgttaaggaagatagattatctactattcatatagaa
gaatatgaagctgaagctagagatacaaagctagggccagaagagattactagagacata
cctaatgtaggcgacgatgcaattaagaatctggatgaaagaggaataattagaatcggt
gctgaggttgaatctggggatatcttagtaggtaaagtaacacctaagggtgaaactgaa
ataactcctgaggaaagattgcttcgcgcgatatttggtgagaaagctagagaagttaga
gatacatctcttagagttccacatggagagtcaggaattatagttgatgtccgcatattt
acaagagaaaatggggatgaactatctccaggagtaaatgaacttgtaagatgctacatt
gctaaaaagagaaaaattaatgttggagataaaatggcgggtcgccatggtaataaaggg
gttatttctagaattcttccagaagaggatatgccatttatgcctgatggaacaccagtt
gaaatcgtacttaaccctctaggcgtaccttcgcgtatgaatattggacaggtactggaa
attcatatgggacttgctgcaaaagctctgggatggcatgttgcaacacctgtatttgat
ggagcagttgaggaagacatcttccaagctcttgataaagctggttatccaaagagtgga
aagattcatcttcaagatggaagaactggagattattttgacaatccagtaactgttgga
tacatgtatatgcttaagcttcaccaccttgtagacgacaaaatacatgcaagatcaact
ggaccttactccttagttactcagcagcctcttggaggtaaagctcagtttggaggacag
cgttttggagagatggaggtttgggctcttgaggcatatggagcagctcacacacttcag
gaaatccttacagttaagtctgacgacgtggttggtagggttaaaacttacgaagctatc
gtaaagggtgaaaatgttccagaaccaggcataccagagtcatttaaggttcttataaaa
gagcttcaatcactttgcttagatgttaaggttctaactgaaactgatgaggaaattgaa
gttagagaatctattgaagaagctgcacttgttgatgaatttgagtatgtagcagaagat
agagatgacatgatagaggaagttttaacgcctgaagaagattttaaccttgaagaagaa
ggcgatgatgatatagattttgattcatttatttctgatacagatgaggaagatgatgag
tttgatttttag
DBGET
integrated database retrieval system
