Cydia strobilella (spruce-seed moth): 134742059
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Entry
134742059 CDS
T10503
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134742059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134742059
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
134742059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_11
TPR_CcmH_CycH
TPR_14
TPR_17
TPR_12
TPR_19
ANAPC3
TPR_7
SNAP
TPR_6
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
134742059
NCBI-ProteinID:
XP_063531057
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All DBs
Position
6:complement(8678267..8682469)
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AA seq
1270 aa
AA seq
DB search
MADIKALLKEARKLIDDNNYKDAQECCKNILRKDKQNYIALVLLGKSLQDADQAPLAYQK
AIASKPDHPLAWHGLANYYERKDDESSKTKLITVYDEILKLEIEEDKALEIITKLGQLGC
HLKSNEAITTLLHYKDKVSEAKLLGAVENQLLELLKSGISCKEDDIQSILKLLDQHYIKD
PSSSLELLYAKVILQKSDYAKAVDEIIGPQFFSQNVVLREFLCKHICNTYVRDNSFNNIP
IESLVDKITDGIENSKYPGLLKCMICFDKTEYLEAYKQCVPLINYQQADITEATFIIKCA
MMLEKWPVVQKLATNFLPKAKEPNFVLDLKRYLFLSLAKQRKWKQAISALSEIPIGTLSI
SEQAILAECYIEINENAEHIMEQLQSSKYHLQLQALFLLKQQKYAETVTLLKNINDEPLC
MFYLGKALWKLKDCEKSQINLLKAARLNPHHPETFLYLGHFYHDYKNDLEKSRKCYEKAH
SLDSTNPKITKKLSEVYTKLELREADFELLLAAGKNMQESWLNFRLGLHYMIKRLWENAV
VQFRNVIKSDQGNITAFECLADAYFSRGSYTSALRAYNKVMTANPSRSSHCLTKIGKIHS
LLTQYEEAIATYEKVLKIDANSMLALKGIAETWMRIAKKKVMAKVYGSARDCAQQAINYL
IKALQKQKQFICLWKLLADTLIFVTTLPNKYAYAYMTDLLVQSDENIQTYQKLGIFPKAI
ACYSLVAKKNQQSASYELASTYFAFHQESRKLVNCHIAYKLTLQCIKEKPTHWRNWNLLG
KICLFIKKYDLAQHCFIKALFVTRKWSVAKIWCNLGTLYVKLNHHKLANYCFWRGQSTLP
SYPLSWIGQALIAEVIREEEAMDLFRHASRLGYHPESALGYADWVCRTLKKSSNYKENSE
LKYVIDGLHAIPYAIDLVEWYSTFEPNNACACTILGILQERFGLIRAAFKSYEKALQYAD
DENRNITFLNMGRILMRMERYDEAVKVYKAITEASLDSTCGLALALYKKGLYEESYAAYD
AALHWLSNDDDDKADILVAMAGIVYMYKGADDAKTLLFHSIQISQKKPTPYSLFAICSLG
VIHSDQSLSKLAVSEMQKYEMDSNFGFDIGFLRSYVLLCDENIDGAIKLLSDSLHDHPSN
ALLWFCMAQYCLRESNQRAKVASSCAQRALCLAHYGECKCNPAEIISAASIAEHFSGNQA
KALLLAKEGLHIYPNKSEIWAALLFSLLPHKKWIERKDWLLAAAGHMRRHLEISRSLSRW
VNLVEKKLSR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggctgacattaaagcattgttgaaggaagcaaggaaactaattgatgataacaattac
aaagacgcacaagaatgttgcaaaaatattctaagaaaggataaacaaaactatattgca
ctagtgctccttgggaaatcactacaagatgctgatcaagcacccctagcatatcagaag
gctattgcaagcaaaccagaccatccattagcttggcatggtcttgccaactattatgaa
cgaaaagatgatgaatcctcaaaaacaaaactgattactgtctatgatgaaatattgaag
ttggaaatcgaagaagacaaagcattagaaataattaccaaacttgggcaactcggctgc
catctaaaaagcaatgaagcaatcactactcttctccactataaagacaaagttagtgag
gcaaaattattgggtgcagtagaaaatcaactattagaacttcttaagagtggtatttct
tgtaaagaagatgacatacagtcaattttaaagctattagatcagcattacataaaagat
cctagcagttctctggagctactttatgccaaagtaattctgcaaaaaagcgactatgca
aaagcagttgatgaaattataggccctcaattcttttcacaaaatgttgtgttacgggaa
ttcctttgcaaacacatatgcaacacttatgttagagataactcattcaataacatacca
atagagagccttgtagacaaaataacagatggaattgaaaattccaagtaccctggcttg
ctgaaatgtatgatttgtttcgacaaaacagaatatttggaagcttataagcagtgtgtc
ccattgataaactaccaacaagcagacattacagaagcaacatttattataaaatgtgcc
atgatgctagagaaatggccagttgtacaaaagttagctactaacttcctccctaaagcc
aaagaaccaaattttgtcttggatttgaaaagatacttgtttttgtcacttgccaaacaa
agaaaatggaaacaagctatttctgcattatccgaaatacccattggtactttgagtatt
agtgaacaagctattctcgcagaatgttacattgaaattaatgaaaatgcagaacacata
atggaacagcttcagtctagtaaataccaccttcaactccaagctttatttttactgaaa
cagcaaaaatatgctgaaacagtaacacttttaaaaaacattaatgacgaacccttgtgt
atgttctacttaggcaaagcactctggaaactaaaggactgtgaaaagagccaaatcaat
ttattgaaggcagcaagacttaacccacaccatccagaaacatttttgtatttaggccat
ttctaccatgattacaaaaatgatttagaaaaatcaagaaaatgttatgagaaagcacac
agtttggacagtaccaatcccaaaataactaaaaaattaagtgaagtttacacaaaattg
gaactaagagaagctgattttgaactcctgttagctgcagggaagaacatgcaggagtct
tggttgaatttcagattggggctacactatatgattaaaagattgtgggaaaatgctgtt
gtacagtttagaaatgttatcaaaagtgatcagggaaatattactgcttttgaatgttta
gctgatgcatatttttctcggggctcatacacatcagcattaagagcttataataaagta
atgacagccaatcctagcaggagctcacactgtctaacaaaaataggaaagatacattct
ctcttaacacagtatgaagaagcaattgccacatatgagaaggttttaaaaattgatgct
aattctatgttagctttaaaaggcatagcagaaacatggatgaggattgccaagaaaaaa
gtaatggctaaagtatatggtagtgcaagagattgtgctcagcaagccataaattacctt
atcaaagcattacagaaacaaaagcaatttatctgtctttggaagcttttagcagatact
ttgatatttgtcaccacattgccaaataaatatgcctatgcatatatgacagatttactt
gtgcaatctgatgagaatatccagacatatcaaaagctaggcatcttcccaaaagcgata
gcatgttactctcttgttgctaaaaagaatcagcaatctgcatcttatgaattagcatcg
acttactttgcattccatcaagaatcacggaaattggtaaattgccacatagcttataag
ttgacacttcaatgcataaaggaaaagccaacccattggagaaattggaatttgctcggg
aaaatatgtctatttataaagaaatacgatcttgcacagcattgtttcatcaaagcttta
tttgtaactcgaaaatggtctgttgccaaaatttggtgtaatctgggaaccctgtacgta
aagttaaatcatcacaagttggctaactactgtttttggcgcgggcagtccactctgcct
tcttatcctctgagttggattggacaggcactgattgcagaagtcattagggaagaggaa
gctatggaccttttcagacatgcgtctcgacttggataccaccccgaaagtgcacttggc
tatgctgattgggtgtgccgcacattaaaaaagagtagtaactacaaagaaaactcagag
ttaaagtatgttatagatggtctccatgcaattccttatgctatagatcttgtagagtgg
tactctacttttgaacctaataatgcttgtgcctgcaccatactcggaatcctccaagaa
cgctttggacttatcagggcggcatttaaatcatatgaaaaagcattgcagtatgctgat
gatgaaaatagaaatattacctttctgaatatggggagaatattgatgagaatggagaga
tatgatgaagcagtgaaagtgtataaagcaataactgaagccagcttggattctacatgt
ggcttagcccttgccctctataagaaaggcctttatgaagaatcatatgcagcttatgat
gcagctctgcattggttgagcaatgatgatgatgataaagcagacattcttgttgctatg
gctggcattgtgtatatgtacaaaggagcagatgatgcaaaaacgctacttttccatagc
atccaaatatctcaaaagaagcccacaccatacagcttatttgcaatttgctcattagga
gttatacattctgatcaaagtctatctaaacttgctgtaagtgagatgcaaaaatatgaa
atggatagtaactttggatttgatattgggtttctgaggtcttacgttctcttatgtgat
gaaaatattgatggagctataaaattgcttagtgattctcttcatgatcatccaagcaat
gccctgctgtggttttgcatggcccagtactgtcttagagaatccaatcagagagctaag
gtggccagcagttgtgctcagagagccttgtgcttagcacattatggagaatgtaaatgt
aatccagctgaaatcatttctgctgccagcattgctgagcatttttcgggcaaccaagcc
aaggccttgttgttggctaaagaaggcttacacatttatcctaataagtcagaaatctgg
gctgctctcttgttttctctcttgccacacaaaaaatggatagaacggaaggactggtta
ttggctgctgctgggcatatgcgaagacatttagaaatctcgcgctctctgagtagatgg
gttaatcttgtagagaaaaaactaagtaggtaa
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