Cydia strobilella (spruce-seed moth): 134750903
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Entry
134750903 CDS
T10503
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb04136
Autophagy - other
cstb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134750903
04136 Autophagy - other
134750903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cstb04131
]
134750903
03029 Mitochondrial biogenesis [BR:
cstb03029
]
134750903
Membrane trafficking [BR:
cstb04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
134750903
Others
Specific organelles associated proteins
Auto phagosome
134750903
Mitochondrial biogenesis [BR:
cstb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134750903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
ATG16
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_EIPR1
eIF2A
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_IFT122_1st
FKBP15
Rod_CreS
CCDC93_CC
Lebercilin
CCDC113_CCDC96_CC
NET2A
HOOK
DUF6212
LRRFIP
FAM76
Fez1
Motif
Other DBs
NCBI-GeneID:
134750903
NCBI-ProteinID:
XP_063542215
LinkDB
All DBs
Position
2:9312436..9661226
Genome browser
AA seq
570 aa
AA seq
DB search
MEGGEWRNSIISQLQTRNKYQTAAFQDVITFQSRLFDNVNTLKNENLQLTLVNERIRFST
SENGLPSAGGGSNERVQALEQKILVQQEELTNLHRRRGESSQQIINLNAKVHDLEKQLQA
KDIVISENTALIASLRAEIQLYENNMTELEGLNTVLRDEHQALQIAFAAIEEKLRKAQDE
NRTLVERLIKYKSKDADKMNDENEHFLKSSPTAFLINTFGRVSFGKKSDRVRRELEEAAR
EGGSRGSIGSAGSSAEDKILDSMPYYATALPTKVALRFDAHEGDVNAVKWSPTERTLATG
GADRKVKLWDLSKMGTVENKGTLVGSNAGVMSVDFDSTGAYLVGASNDFASRVWTVADQR
LRHTLTGHSAKVMAAKFLGEPTKVITGSHDRTLKIWDLRSKMCTETKFAGSSCNDLVTSD
SAGSTIISGHFDKTIRFWDIRTEMSANHIVLQGKITSLDLSRDSNYLLACVRDDTIQLID
LRQNTIVRTFSHEAFKVGCDWSRAAFGPAGRLLAVGAADGAAYVWNTHSGKLEATLKDHS
AAVTAVSWHPQSGLLASVDRGKRAVIWGDL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggagagtggagaaatagcataattagccaattacagacccgaaacaagtat
caaactgcagcctttcaagatgttataacatttcaaagccgtctctttgacaatgtcaac
acacttaagaacgaaaatcttcagttaacactggttaatgagaggataaggttttcaaca
tctgaaaatggtttaccaagtgcaggtggtggcagcaacgagagagtgcaagcattagaa
cagaagattctggttcagcaagaagaactcacaaatttgcatcgaagacgcggcgaaagc
tctcagcagatcataaacctaaatgctaaagttcatgacttggagaaacagctgcaagca
aaggatattgttatttcagaaaacactgccttgatagcttctcttcgtgccgagattcaa
ctttatgaaaacaacatgactgaattagagggactaaacactgtactaagagacgagcac
caagccttacaaatcgcgtttgcagctatagaagagaaattgaggaaagcacaggacgaa
aatcggacgctcgttgaaagacttatcaaatacaaatcaaaagatgccgataaaatgaac
gacgagaacgagcattttctcaagtcaagccctaccgcgtttctcatcaacacgtttggt
agagttagtttcggaaaaaagagcgacagggtacggagagagttggaagaagccgccaga
gaaggtggcagtcgaggcagcatcggatcggcgggtagttcagcggaagataaaatcttg
gattcgatgccgtattatgccacagctttgccgaccaaagttgctttacgatttgacgcg
catgaaggagacgtgaatgcggtaaagtggagcccgacggaacggacgttagcaacagga
ggagcggatagaaaagtcaaattatgggacttgtctaaaatgggcacggtggagaacaaa
ggcacactagtcggctccaacgccggcgtcatgtccgtcgacttcgactccaccggggcg
tacctcgtgggcgcttccaacgacttcgcgagccgcgtgtggaccgtcgccgaccaaagg
ctaaggcatacactaacgggtcacagcgccaaagtgatggccgcgaagttcctgggagag
cccaccaaagtgatcaccggcagccacgaccggacactcaagatatgggacctaaggagt
aaaatgtgtacagaaacaaagttcgcgggatcgtcgtgcaacgacctggtcacctcggac
agcgccggctccacgatcatttcgggccacttcgacaagacgatacggttctgggacata
cgcaccgagatgtccgccaaccatatagtacttcaaggaaaaatcacctcactagacctg
agtagagatagcaattatttgctggcgtgcgtacgcgacgatacaatacagctgatcgat
ttgcgacagaacaccattgtccggaccttcagtcacgaggcgttcaaggtggggtgcgac
tggtcgcgggcggcgttcgggccggcgggccggctgctggcagtgggggcggctgacggc
gccgcctacgtgtggaacacacattcgggcaagctggaagccactctaaaagaccactcg
gcggcggtgacagctgtatcgtggcacccccagtcgggactgctggcatccgtggaccgc
ggcaagcgcgctgtcatctggggcgacttgtga
DBGET
integrated database retrieval system
