Cydia strobilella (spruce-seed moth): 134756033
Help
Entry
134756033 CDS
T10503
Name
(RefSeq) nucleoporin Nup188
KO
K14311
nuclear pore complex protein Nup188
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134756033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134756033
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134756033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
FANC_SAP
Motif
Other DBs
NCBI-GeneID:
134756033
NCBI-ProteinID:
XP_063548874
LinkDB
All DBs
Position
3:18011059..18025614
Genome browser
AA seq
1809 aa
AA seq
DB search
MTTATVCYWKQLWRWTTSNSLSSEELTAVLHKKEIIDALREGLASYKPWKKEGYAQLQTK
HADQTSLLNVVHTLQNYMDVDCFQIWEILKHYLCDISYGTTANALKNVAFVDTRPTFLLP
NIWNFYYAERLFLLKLLQYILQHKDDRSHKYQAQFSKIINDIGLDKLRESLIDQFEKVLY
TAPPPRRIHNEFSSDTVRQEWAEFKLREKVALLQNILLLAVEKPFTDADFIKLFSLYKKH
NFGKNLGYNELLEQEHKELCMRLMYLETCIFMVMLAKVDKSQDKLPAWINKTKEVVESEL
RQLQLSPEHSPMLMAWMLLLLQSNEHAKLFESQYHHFGATALKMRLFEFLHAMLSSPVFS
DRSPCASLARSYTFRFLNELCDRFDGDGTISNQPGVMPLCSLLLETEELSTEFWKLTQKE
EGNGVVSLWNTALEFFPHNFSSLSVLSAGLAKGGVNSVRNLVAELKSLPVYTEIFNPNTV
PIMAMNSEEAVIGRDHYPLGGPTYRIEAGSKATIMERKEGTMIHYRTPYSYWTVLNKVIE
QALDRKGHHQHDISMTLQRVYEGTKVLKRVLKALVEYKEIPKMLVEPSEGVFDVLVRFMK
AETPPLSLLVECLETCTALIPLFPKEIHMRLINTGLLPRIINRQLSPARYAAGEGLDSAA
AGAYLVTLEQPSGSYSFLKAYIEMLCTFHEMCDDERISSEIILPGVVLILREVFPSVTEW
RYSNARERRSLLHLCSKFLNLLLQQTNRSVAKDTCVFSLLYTENALELLKIVSIGNSQLE
RMMHGETNWTSGECTQHVTTVQRCVAIIMFALRLKSTVTSASEVTPLEHLVFAQNTQKGA
LRVVPRVASYINHAFNKSLPVLAFRLLKKFAHGFQMSLFAALDMTAHQVRVMFLDRLSDK
HETTELKVAILEFVTTCIANQPGLTEAFFNISHEKMDTTGKDDKVQIKQDESVEGVLSYM
ADYLGTVKADPKLLDSPLLSCIMGLFHALWKNNMQILIKKLRENPKFWEHMTSPLFSEIQ
PGLNTYAQIFNVLGIELFVSREKYESGFKDMLEKFFDTSNNYLDTWIGYIFSFKCRTEGE
QMVDRVPVWLGLLTSWKDFTTIFCKCLPFSLNIAHKAKMVAPCMTALLNELDELKDGRLV
VILAELYVIMLANWKEDCFENRKASAKQIDNLLTNTAIVYECLHPRAVRAILSIGTVAIS
TLDYEIKGNSDIAQSVIRSVTNINSLELEKLFNDMKEESAPKLKEKSEEIPTVVLSLAML
EQCLELYDNMSVGLPQWFQSTRFINKLLCCLQNCLHNRRHYHTCLAALRCLTAYARGPFA
NELLMSDVDQFLWLKLLPPKFENGSWKPEEWWRVYGHSLDFISMMVMKHGQFFAGDAITF
VGVHLEHLVEAVLLPRQFVNLDALNLCASSLNLVVQLVKYESRWRIENINSMMAIMRSIS
ACLYQCVTLILRSRRSSDPALPPLDENQQSPTILHRILEILHMATLCLHSFSPSLLALLA
APVDVERWQPLVELHFGAPKISYEPCPQLTFGTLLAAVCMLTRSLNHAYHSEESSVARSP
RGRRRACSCSPGEPRRANRSESLTSISSQTSVGPLLNDRLVAGALEATATLAASQALLVV
RDPNVPSRHKQHVRRELASELALFHDFVRKRILCGAHARSHLARNHLGAWPLPANEEEFK
RIQEVQRERNPTMDEESLPPPPPPKRASQDSMREYILRKHYLDKCAQTPTKEPSPVSHST
PAPDKKKEVSRSSKRVSWAETTTSDESLETSLEAIESVYSNLTDVQINNDEDYFHFMSVV
FLYICQNEL
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgccacagtttgctactggaagcaactttggagatggacaacatcaaatagc
ttatcgagtgaggaactgacagctgtgttgcacaaaaaggagataatcgacgcactacga
gagggcctagcaagttacaaaccttggaagaaagaaggttatgcacagctgcaaacaaaa
catgctgatcaaacttcacttctgaatgtcgtgcacacgttacagaattatatggatgta
gattgttttcaaatatgggaaatactaaagcactatctctgtgacatatcttacggcaca
acagcaaacgctcttaagaatgttgcatttgtggacactcgccccacttttctactgccc
aacatatggaacttctattatgcagagagacttttcctactcaagttgttgcagtatata
ttgcaacacaaagatgatagaagccacaaatatcaagcacaattcagtaaaataatcaat
gacataggattggataagttgagggaatctttaatagaccagtttgagaaggttttgtat
acggccccgcctccaagaagaatacataatgaattttccagtgacacggttaggcaagaa
tgggcggagttcaaactgcgagagaaggttgccttattacagaacatactgctgttggct
gttgaaaagccatttactgatgcagattttataaaactgttttcactgtataagaaacat
aattttgggaagaatttgggatacaatgagttgttggagcaagagcacaaggagctctgc
atgagactgatgtatctggagacttgtattttcatggtgatgcttgccaaggttgacaaa
agccaagacaagttgcctgcatggattaacaaaacaaaagaagtagtagaatctgaactc
agacaactgcaacttagtccggagcacagccctatgctaatggcctggatgttactctta
ttgcagagcaatgaacatgcaaaactgtttgaaagccaatatcaccactttggtgcaact
gccctcaaaatgcggctatttgagtttcttcatgcaatgctaagcagccctgtgttttct
gatagatctccatgcgcctcgctagcccgtagctacacctttcgcttcctcaacgagcta
tgcgaccgcttcgacggtgacggcaccatcagcaaccagcccggggtcatgccactttgc
tccctattgctagagacagaagaactatccactgagttctggaagctgacgcagaaggaa
gaggggaatggtgttgtgtcgctatggaatacggcactggagtttttccctcataatttt
agctcgttgagcgtgctgtcagctggactggcgaagggtggggtgaatagtgtaagaaat
ctcgtagccgaactgaaaagcctaccagtctacaccgaaatcttcaatcccaacacagtc
ccaataatggctatgaactccgaagaggccgtcataggccgcgaccactacccactaggc
ggcccaacctatcgcatcgaggccggatctaaagccactatcatggagagaaaagaaggc
actatgatacattacagaactccttatagctactggactgtgttgaataaagtaatcgaa
caagcgttggacagaaaaggacatcatcaacatgatattagtatgacgttgcaaagagtt
tacgaaggcactaaggttttgaaaagagtgttaaaagctttagtggagtataaagagatt
ccgaagatgttagtagagccgagtgaaggtgtttttgatgtgctagtgcggtttatgaag
gcggaaacgccgccattgtcgttgttggtggagtgtttggagacgtgtacggcgttgata
ccattgttccctaaagagattcatatgcggctgataaacactggtcttcttccacgcata
ataaaccgccaattgtcccctgctcgatacgcagccggtgaaggtctggattcggccgct
gcgggcgcctacctcgtcactctagagcagcccagtggctcctacagcttcttgaaggcc
tacattgagatgctgtgcacattccacgagatgtgcgacgacgaacgcatctcctccgaa
atcatcctccccggcgtcgtcctgatcctccgcgaagtgttccccagcgttaccgagtgg
cgttacagtaacgcgcgggaacgccgttcgctcttgcacctgtgctccaagttcctcaat
ctgttgctgcaacagaccaaccgcagtgtggccaaggatacctgtgtgtttagtttgttg
tatacagagaacgcattggagctcctgaagattgtttcaattggtaacagccaacttgag
cgcatgatgcacggtgaaacgaactggacgagcggcgaatgtacacaacacgtaaccacc
gtccaacgctgcgtcgccatcatcatgttcgcgctacggctcaaatcaaccgtcacatcc
gcgagcgaagtgacacccctagagcatttagtgttcgctcagaacacacagaagggcgct
ctgagagtcgtccctagggttgccagttacataaaccatgcgtttaataagagcctgccg
gtattggcttttcggttgttgaagaagtttgctcatggcttccaaatgtccctgttcgcc
gctctcgacatgacggcgcaccaggtccgcgtcatgttcctcgaccgcctcagcgacaag
cacgagaccaccgagcttaaggtcgccatcctggagttcgtgaccacctgcatcgccaac
cagcccggcttgaccgaggccttcttcaatattagccatgagaagatggatacgactggc
aaggatgacaaagttcagattaagcaggatgaaagcgtggagggcgttttgagttacatg
gcggattatcttgggactgttaaggctgatccaaaactactcgacagcccattgctatca
tgtatcatgggcctattccatgctctgtggaaaaacaacatgcaaatcctaataaagaaa
ctacgcgaaaacccaaaattctgggaacacatgaccagcccactgttcagtgaaattcaa
cccgggctcaacacttacgcgcaaatattcaacgttctcggcatagagctgtttgtctcg
cgagaaaaatatgagtctggtttcaaggacatgctcgaaaagttcttcgatacgagcaat
aattatctggatacgtggattggctacattttctcgttcaaatgtaggactgagggtgag
caaatggtcgatagagtaccagtttggctgggactcttgacgtcttggaaagatttcacc
accatcttctgtaaatgtctgccttttagtttaaatatcgcgcataaagctaaaatggtt
gccccctgcatgacagcactcttgaacgaacttgacgaacttaaagatggaagactcgtt
gttatattagcggagttgtatgtcatcatgcttgcaaattggaaggaagattgctttgaa
aaccgaaaggcgagcgctaagcagatagataacttgctcactaatacagcaatagtgtac
gaatgtcttcatcctcgggccgttcgcgctattttgtccataggaactgttgcgattagt
accttagattatgagatcaaaggcaacagtgacatagcgcaaagcgtcatcagatccgta
actaacataaacagtttggagctggagaaactattcaatgatatgaaagaagaatcggcg
cctaaactaaaggaaaagagtgaggaaatccctactgttgtactctctttagccatgctc
gagcaatgcttagaactttacgacaatatgtcagttggtctcccgcaatggttccaatcc
acaagattcatcaacaaactgctttgctgccttcaaaactgcttacacaatcgcaggcac
taccacacttgtttagccgctttacgatgcttaacagcatacgcgagaggacctttcgct
aatgaactactaatgagtgatgtcgaccaattcctatggctgaaattacttcctcctaaa
ttcgagaacgggtcatggaaacccgaggagtggtggcgtgtatacggacacagtttggac
tttatttccatgatggtaatgaagcatggtcagttcttcgccggggatgctataaccttc
gtgggcgtacacttggagcatttagtagaagccgtgttgcttcctcggcagtttgtgaat
ttggatgcgctaaatttgtgcgcttcgtccctgaacctggtggtgcaactggttaaatac
gagtcgaggtggcgtatagagaatatcaactctatgatggctattatgaggagtataagc
gcgtgtctgtaccagtgcgtcacgcttatcctccgttcccgccgctcctccgacccggcg
ctgccgccgctggacgagaaccagcagtcgccgaccatcctacacaggatcctggagatc
cttcacatggcgaccctatgcctgcactcgttcagcccatcgctgctagccctgctggcc
gcgcccgtggacgtggagcgctggcagccgctagtggagctccacttcggcgcgcccaag
atctcgtacgagccgtgcccgcagctcaccttcggcacgctgctggcggccgtgtgcatg
ttgacgaggtcgctcaatcatgcgtaccacagtgaggagtcaagcgtcgcgcgctccccg
cgcgggcggcggcgcgcctgctcctgcagcccgggcgagccgcgccgcgccaaccgcagc
gagtccctcaccagcatctcgtcgcagaccagcgtgggcccgctgctcaacgacaggctg
gtcgccggcgcgctggaggccaccgcaacgcttgccgcttcacaggcgctcctagtagtc
cgcgaccctaacgtgccgtcccggcacaagcagcacgtccgccgcgagctcgcctccgaa
ctcgcgctattccacgacttcgtccgcaaacgcatcctctgcggcgcccacgcccgctcg
cacctcgcgcgcaaccacctcggcgcgtggccgctacccgccaacgaggaagagttcaag
agaatccaagaagtccagcgggaaagaaacccgaccatggacgaggaatccctcccccct
ccaccaccccccaagcgcgcctctcaagactccatgcgtgaatatattttaagaaaacat
tacttagacaaatgcgctcaaacacctactaaggaaccttcccccgtctcacactccact
cccgcccctgacaagaagaaagaagtctccagaagctcgaaacgagtgtcctgggcggaa
acaacaacaagcgacgaaagcctagaaacgtcgctagaagcaatcgaatcggtgtattct
aatctcacagacgtacagatcaataacgatgaggattatttccattttatgtcagttgtt
ttcctttacatttgccagaatgaattgtaa
DBGET
integrated database retrieval system
