Cytobacillus suaedae: IM538_05760
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Entry
IM538_05760 CDS
T08143
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csua
Cytobacillus suaedae
Pathway
csua03420
Nucleotide excision repair
csua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IM538_05760
03430 Mismatch repair
IM538_05760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csua03400
]
IM538_05760
Enzymes [BR:
csua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM538_05760
DNA repair and recombination proteins [BR:
csua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IM538_05760
MMR (mismatch excision repair)
Other MMR factors
IM538_05760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QOR67647
LinkDB
All DBs
Position
complement(1096632..1098884)
Genome browser
AA seq
750 aa
AA seq
DB search
MDKASYNNKTLQLDSLPREQYQIIYEAGTIGKLSCIHCGESVKLYLGIQQKPFFYHSSKA
FNNDCEEYCNSLSTSPPETEIQEEVQNGFRIPKSRPIGQISTKQSEWKQVTFLRLPKPFQ
KQSTPANTSADSLDSSQQIAVSTVNGPLLLLAGAGSGKTRVLTRRTASLITEHGIDPSTV
MLVTFTAKAAHEMKERLRTLLAPPQLNRLVVGTFHSIFYKMIAFHEPTRWQNTNLLKFDW
QKEQMIKEAGRMLDIDERDFAFDQALQQIGLWKNTLTLPEAIKPKDLWEERVVFMYKHYE
DEKAKRELFDFDDMLVGCYQLLKNQPDLLTKYQQKFQYFLIDEFQDINKIQYEIMKMLAS
KSRNMCVVGDDDQAIYAFRGSDPSFILNFNKEFQDAKTVMLSENYRSTHSIVQSANTVIS
RNTQRHHKTMNAQFDNGFLPAFFFPHDEEEEATMIVTDLKERIEQGASPSDFAILYRTHT
SSRALFERLAGSNLPFTVEQDAESFYKRKIVKTLIAYLRLSIDSNHSNAMGDLLVALFLK
KNTLNDLKASSILEDCSLVEALKYVKNIQAFQERKLKKIVPLFKAIVKLKPIQAIETIEK
EMGFDDFIKKRGNEGNVIEKGSDDVRDLKVAARKFSTVQDFLEHIDHMIAMNDEMKKLSK
HYTNAIQLSTIHRSKGLEYKHVYILSAVDGSLPHDFALDSSRNGETAPLEEERRLMYVAM
TRAKETLHISIPETRRGKTAQPSRFIKSLY
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggataaggcaagctataacaataagactctacaactagactcattgcctagagaacaa
tatcaaattatatatgaggcaggaacaattggaaaactatcctgtattcactgtggagaa
tcagtcaagctatacttagggatacagcaaaaaccctttttctaccattcctcaaaagcc
tttaacaacgattgcgaggagtattgtaacagtctatctacttcaccacccgaaacggag
attcaagaagaagtacagaatgggtttcgaattccaaaatcaagaccgatcggacaaatt
tctactaaacaaagtgagtggaaacaggtcacattcttgcgtttaccaaaaccctttcaa
aaacagtcaacacccgcgaatacttctgctgattcattagattcaagtcagcaaattgct
gtctctacagttaatggacctttactattattagctggagctggtagtggaaaaacaagg
gtgttaacgagacgaactgcatccttgattaccgaacatggcatagacccaagtacagtg
atgcttgttacctttaccgcaaaagctgcacacgaaatgaaggaaagactaagaacactt
ctggctcccccacagctaaaccggttagtggtaggaacatttcatagtatcttttataaa
atgattgcctttcacgaaccaacccgctggcaaaataccaatcttctaaaatttgattgg
caaaaggaacagatgataaaagaagctggaagaatgcttgatattgatgaaagagatttc
gcttttgatcaagctttacagcaaattggactttggaaaaatacactaactttacctgaa
gctatcaaaccaaaggacctctgggaagaacgcgttgtctttatgtacaaacactatgaa
gacgaaaaagcaaagcgtgagttatttgattttgacgatatgttggtaggctgctatcaa
ttattaaagaatcaaccagatcttttaactaaatatcaacaaaagtttcaatactttctt
atcgatgaatttcaagatattaataaaattcaatatgaaattatgaaaatgttagcttca
aaatcaaggaatatgtgtgtagtaggtgatgatgaccaagctatctatgctttccgtgga
agcgatccaagctttatccttaacttcaataaagaatttcaagatgcaaagacggtcatg
ctcagtgaaaattatcgatctactcatagcattgtccagtccgctaatactgttatcagt
cgaaatacacaaagacatcacaagacaatgaatgctcaatttgataatggcttcctaccc
gcttttttctttccacatgacgaagaagaagaagctacaatgattgttacagacctcaag
gagcgaattgagcaaggagcatctccttcagactttgccattctttaccgcactcataca
tcatcaagagcactgtttgagaggcttgcagggagtaatttaccatttacagttgaacag
gatgcggaatctttctacaaacgaaaaatcgttaaaacattaatcgcatacctccgctta
tccatagactctaaccattcaaatgcaatgggtgacttattagttgctttgtttttgaaa
aaaaacacgttaaacgacttaaaagcatctagtattctcgaagattgctcattagttgaa
gcattaaaatatgtaaaaaacattcaagcctttcaggaaagaaagcttaagaagattgtc
cctctttttaaagcaatcgttaaattaaagccgattcaagcgattgaaacgattgaaaaa
gagatgggttttgatgactttataaagaaacgcgggaatgaaggaaatgtcatcgagaaa
ggctccgatgatgttcgcgacttaaaagtagcagcaagaaaattctccactgttcaagat
ttcttagaacatattgatcatatgattgcaatgaatgatgaaatgaaaaagcttagcaaa
cattacacaaatgccattcagctttcaaccatccatcgttcaaaaggacttgaatacaaa
catgtctatatactaagcgcagtcgacggaagcctcccgcacgacttcgcactcgactca
agcagaaacggcgaaactgcccccttagaagaagaacgccgtctcatgtacgtagccatg
acaagagccaaagaaacactgcacatctcaatcccagaaacaagaagaggcaaaactgca
caaccatcacgatttataaagtccttatattaa
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