Cytobacillus suaedae: IM538_14000
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Entry
IM538_14000 CDS
T08143
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
csua
Cytobacillus suaedae
Pathway
csua03030
DNA replication
csua03430
Mismatch repair
csua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM538_14000
03430 Mismatch repair
IM538_14000
03440 Homologous recombination
IM538_14000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csua03032
]
IM538_14000
03400 DNA repair and recombination proteins [BR:
csua03400
]
IM538_14000
Enzymes [BR:
csua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM538_14000
DNA replication proteins [BR:
csua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM538_14000
DNA repair and recombination proteins [BR:
csua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM538_14000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
DUF533
Motif
Other DBs
NCBI-ProteinID:
QOR64954
LinkDB
All DBs
Position
2624794..2625498
Genome browser
AA seq
234 aa
AA seq
DB search
MPVDFQIIEYYLYKQFIQKYKLNQAMLHPSYSSLNQALESYRQPVMDQDNFITNEFTVFD
LETTGFFPDLGDEILSIGAVKIKEGLVQFDETFYKVVKPIHTVSKATKKLTGLTTEDLKR
GTPLPDAIQEFLAFSEGSILVAHPASFDISFLRKVLHKWELPPIETVYVDSFLVANSLYP
EEKNFLDQLVRRFNIPKRLRHHALYDAIMTAEIFIQLLKDIEHEKIAQFLQSTS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgtcgattttcaaattatcgaatactatttatataaacaatttatccaaaaatat
aaactgaatcaggcaatgcttcatccttcctactcaagcttaaaccaagcattagaaagc
tatcgacagccagttatggatcaagataacttcattacaaatgaatttacagtatttgac
cttgagacaacgggtttctttcctgatttaggtgatgaaatcctttcgattggtgctgta
aaaataaaggaaggtcttgttcaattcgacgaaaccttttataaagtcgtaaagcccatt
catacagtatcaaaagctacaaaaaaactgacaggtttaacaacagaagacctaaaaaga
ggtactccacttcctgatgctattcaagagtttttagcatttagtgaaggatccattcta
gtagcccatcccgcaagctttgatattagcttcttaagaaaggtactccataaatgggag
ttacctcctattgaaactgtttatgttgattctttcctagtagctaattcactttatccg
gaagaaaaaaacttccttgatcaattagtaagaagatttaatatacctaagcgacttcga
catcatgccctttacgatgcaattatgactgcagaaatttttatacaactactaaaggac
atagaacacgaaaagattgcccaatttttgcaatctacttcataa
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