Capricornis sumatraensis (Sumatran serow): 138088416
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Entry
138088416 CDS
T10522
Symbol
COL9A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04151
PI3K-Akt signaling pathway
csum04510
Focal adhesion
csum04512
ECM-receptor interaction
csum04820
Cytoskeleton in muscle cells
csum04974
Protein digestion and absorption
csum05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138088416 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138088416 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138088416 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138088416 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
138088416 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
138088416 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csum00535
]
138088416 (COL9A1)
Proteoglycans [BR:
csum00535
]
Extracellular matrix (ECM) proteoglycans
Others
138088416 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
DUF4882
Motif
Other DBs
NCBI-GeneID:
138088416
NCBI-ProteinID:
XP_068839644
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Position
11:10536753..10623651
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AA seq
922 aa
AA seq
DB search
MKSLWKLPVLFFACSFLGTWASVTVKRRPRFPVNSNSSGENELCPKVRIGQDDLPGFDLI
SQFQIDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPIRHLYPSGLPEEYSFLTTFRMT
GSTLEKHWSIWQIQDSSGKEQVGVKINGQTKSVSFSYKGLDGSLQTAAFSNLPSLFDSQW
HKIMIGVERRSATLFVDCNMIESLPIKPRGQIDVDGFAVLGKLVDNPQVSVPFELQWMLI
HCDPLRPRRETCHELPARITVSPXTSQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPPGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGPRGFPGRGIP
GPPGPPGGAGLPGELGRVGPIGDPGKRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGGLGEVGAQGPPGAQGLRGITGVAGEK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSPGIPGLPGPKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPGQL
GNSGKPGRQGPPGEVGPRGPRGLSGSRGEVGPVGPPGPPGKLGSLGSPGLPGLPGPPGLP
GMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGVRGPEGSR
GLPGEEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVIQEHFAQMAAS
LKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGMKGPPGALGVRGPKGDAGER
GDRGPPGRGPKGLPGAPGLPGDPGPASYGRNGRDGERGPPGAAGIPGVPGPPGPPGAPGF
CEPASCTMQAGQRAFNTKGPSQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcttatggaaacttccagttctcttctttgcatgcagtttcctggggacatgg
gcatcagtgactgtcaagcgtcgcccaaggttccctgttaattcaaattccagtggtgaa
aatgaactctgtccaaaggtcaggattggacaagatgatttaccaggatttgacttgatt
tctcagttccagatagataaagcagcatccagaagagctatccagagggtagttggatca
accgccttacaggtggcttacaagttgggaaataatgtagacttcaggattccaatcagg
catttatatcccagtgggctgcctgaagaatactcctttctaaccacttttcggatgact
ggaagcacacttgaaaagcactggagcatttggcagattcaggattcctcagggaaggag
caagttggcgtgaagattaatggccaaacaaaatctgtttcattttcatacaaggggctg
gatggaagtctccaaactgcagccttttcgaatttgccctccttgttcgattcccagtgg
cataagatcatgattggtgtggaaaggaggagtgcgactcttttcgtggactgcaacatg
attgagtccttacctataaagccaagaggtcaaatcgatgtcgatggctttgctgtgctg
ggaaaacttgtggataatcctcaagtttctgttccgtttgaacttcaatggatgctgatc
cattgtgaccccctgcgaccccggagagaaacttgtcatgagctgccagccaggatcacg
gtgagtccctagactagtcagaggggccccccaggtgagcagggtcctccggggccgcca
ggtccccctggagtcccgggcatcgacggcatcgacggtgatcgcggtccgaagggtccc
ccgggcccccctggtccccctggagagccggggaaaccaggagctccaggcaagcctggc
acaccgggtgccgacggattaacaggtcctgatggatcccccggctctgttggaccaaga
ggacaaaaaggagaacctggtgtgccaggacctcgtggatttccaggccgtggtatccct
ggacctcctggtcctcctgggggagcaggactccctggagagcttggccgtgttggaccg
attggcgaccctgggaaaagaggaccaccgggaccccctggccccccgggacccagtgga
acaattggctttcatgatggagatccattgtgtcccaattcctgcccaccgggtcgttcg
ggatacccaggcctgccaggcatgaggggtcataaaggagctaaaggagagattggtgaa
cctggaagacaaggtcacaagggtgaagaaggggaccagggtggactgggagaagttgga
gctcaaggacctccgggagctcaaggtttgagaggcatcaccggcgtagctggcgagaaa
ggagaaaagggcgctcggggcttagatggagaacctgggcctcaagggctccctggtgca
ccaggtgaccaaggacagcgaggacctccaggagaaataggtcccaagggagacagaggg
cctcaaggttctccaggaattcctggtctccctgggcccaaaggggacacgggcttgcca
ggtgtggatggccgtgacgggatacctggaatgccgggaacaaagggggaaccagggaaa
cccgggcctcctggtgaagcaggtttgcaggggttacctggtatacctggaattcctggt
gcaaagggtgttgccggtgaaaagggtaacacaggtgctccagggaagcccggtcaattg
gggaattctggcaaaccgggccgccaggggccgcccggagaagtgggaccccgaggaccc
cggggcctttctggcagcagaggtgaagtaggaccagtgggacccccagggccaccaggt
aaactgggttctcttggcagccccggcctccctggcttgcctggcccccctggacttcct
gggatgaaaggtgacaggggtgtagttggtgaacctggtccaaagggtgaacagggcgcc
tctggtgaagagggtgaagctggagaaaggggtgaactcggagatataggattacctggc
ccaaagggatctgcggggaaccccggggagcctggcgtgagggggcccgaaggcagccgg
gggcttcccggagaggaaggaccccgaggcccgcccggcccgcgcggcgtgcagggggag
cagggcgccacgggcctgcccgggatccagggccccccgggcagagcaccaaccgatcag
cacatcaagcaggtttgcatgagagtcatacaagagcactttgctcagatggctgcgagt
ctcaagcgtccagactccggagcctcaggcctccctggacggcctggaccccccggcccc
ccgggcccccctggagagaatggctttccaggccagatgggactccgcggcctcccgggc
atgaagggtccccctggcgctcttggtgtgaggggccctaaaggtgatgcaggagaaaga
ggggatcgtggccccccaggaagaggtcccaaaggtttgccaggagctcctggtctccca
ggtgatccgggtcctgccagctacgggaggaacggccgggatggcgagcgagggcccccc
ggggcggcgggcatccccggtgtgcccggccccccaggccccccgggcgcccctggtttc
tgcgagccagcatcctgcaccatgcaggctgggcagcgggcattcaacaccaaaggcccc
agtcagtga
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