Capricornis sumatraensis (Sumatran serow): 138091564
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Entry
138091564 CDS
T10522
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04151
PI3K-Akt signaling pathway
csum04510
Focal adhesion
csum04512
ECM-receptor interaction
csum04820
Cytoskeleton in muscle cells
csum04974
Protein digestion and absorption
csum05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138091564 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138091564 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138091564 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138091564 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
138091564 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
138091564 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csum00535
]
138091564 (COL9A3)
Proteoglycans [BR:
csum00535
]
Extracellular matrix (ECM) proteoglycans
Others
138091564 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
138091564
NCBI-ProteinID:
XP_068843577
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Position
15:complement(57665844..57684169)
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AA seq
684 aa
AA seq
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MAGAPTLALLLLGQLLAATVTLTEAQKVGPRGPPGPQGPPGKPGKDGIDGEVGPPGLPGP
VGPKGAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLP
GPPGEAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPP
GPPGPPGMPGFKGPTGYKGEPGEVGKDGEKGDPGPPGPPGIPGTVGMQGPRGLRGLPGPL
GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRTGPKGIPGMSGPGGEP
GMPGKDGRDGVPGLDGEKGEAGRHGAPGEKGPNGLPGLPGRAGSKGEKGELGRPGELGEA
GPSGEPGVPGDVGMPGERGEAGHRGSAGALGPQGPPGAPGIRGFQGRKGSIGDPGLPGPQ
GLRGGMGDRGPGGAAGPKGDQGIAGADGLPGDKGELGPSGPVGPKGESGSRGELGPKGIQ
GPNGTSGVDGVPGPPGPVGLQGVRGVPGITGKPGVPGKEASEQHIRELCGGLVSEQIAQL
AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD
RGDKGSAGEGLDGPDGDQGLQGPQGVPGISKDGRDGAHGEPGLPGDPGLPGAIGAQGPPG
ICDTSACQGAVMAAVGEKSGPRSS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcccccaccctggccctgctgctgctggggcagctgctggccgccaccgta
accttgaccgaggcacagaaagtgggacctcgaggcccccctggtccccaagggccaccc
gggaagccaggcaaggatggcattgatggagaagttggtcctcctggtcttcctgggccc
gtgggaccgaaaggggccccagggaagccagggaaaccaggagaggccgggctgcctgga
ctgcctggcgtggatgggctgaccgggcaggatggacctcctggacccaagggcgctccc
ggagaacggggaagcctgggacccccagggccacctgggctggggggcaaaggcctccct
ggacctcctggagaggcaggggtgagcggcctcccaggtggaattggcctccggggcccc
ccgggaccctcaggactcccaggcctccctggccccccaggacctcctggcccccctggt
cacccaggggtgcttcccgaaggtgctactgatcttcagtgcccggccatctgcccgcca
ggccccccagggcccccaggaatgccagggttcaagggacccactggctacaaaggggaa
cccggagaagtcggcaaggatggtgaaaagggtgaccccggcccccctggaccccctggt
atcccgggcaccgtggggatgcagggtccacggggcctacgaggacttccagggccactt
ggaccccccggggaccggggtcccattgggttccgagggccccccgggatcccaggagcc
cctgggaaagcgggcgacagaggagagaggggcccagaggggttccgtggccccaagggc
gaccttggcaggactggtcctaaaggcatccccggcatgtctgggcccggtggagagccg
ggcatgccaggcaaggacggccgggatggcgtgccaggactcgatggcgagaagggagaa
gctggtcgccacggcgccccgggagagaaggggcccaacgggctaccgggtctccccgga
cgagcagggtccaagggtgagaaaggagaactgggcagacctggagagctgggtgaggct
ggcccctcgggagagcctggtgtccctggagatgttggcatgcccggcgagcgtggagag
gctggacacaggggctcagcgggggcactgggcccgcaaggcccacccggggcccctggc
atccgtggcttccagggccggaagggcagcataggagaccccggcctgccgggcccccaa
ggcctccgaggtggcatgggcgaccggggcccgggaggagctgccggccccaagggcgac
cagggcatcgcgggtgctgacggccttcctggggataaaggagaactgggtcccagcggc
cctgttggccccaaaggagagtccggcagtcgcggggagctgggccctaagggcatccag
ggccccaacggcaccagcggtgtagatggcgttcctggcccccctggccccgtgggcctc
cagggtgtgcgaggcgtgcccggcatcactggaaaacctggggtcccggggaaagaagcc
agcgagcaacacatcagggagctgtgcggggggctggtcagtgagcaaattgcgcagctg
gccgcgcacctgaggaagcccctagcaccaggctccatcgggcgcccgggtcctgctggc
cccccgggccccccaggccccccaggctccattggtcaccccggggctcgagggccccct
ggataccgaggtcccacaggagagcttggagaccctggacccagaggaaaccagggcgac
agaggagacaaaggctcagctggcgagggcctggatgggcctgacggagaccaagggctg
caaggaccgcaaggcgtgcctggcatcagcaaagacggccgagatggggctcacggtgag
cctgggctccccggcgatcctggccttcctggtgccatcggcgctcagggacctcctggc
atctgcgacacctccgcctgccaaggagccgtgatggcagctgttggggagaagtcaggt
ccccggagctcctaa
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