Chryseobacterium suipulveris: MTP09_04025
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Entry
MTP09_04025 CDS
T08539
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
csup
Chryseobacterium suipulveris
Pathway
csup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP09_04025 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csup03019
]
MTP09_04025 (rny)
Messenger RNA biogenesis [BR:
csup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTP09_04025 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
DUF4954
KH_2
KH-I_KHDC4-BBP
DUF4407
SpoIISA_toxin
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
UOE41810
UniProt:
A0ABY4BRH6
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Position
850718..852292
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AA seq
524 aa
AA seq
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MTTTIAIIIGIVGLAIGTAIGMFLSKSSLNTKAKFIIDDAKKNAENLIEKATVQAEAVKK
EKHLQAKEKFLELKSQHDADIQQREKKMQEAEKRTKDKESKLNDELSKTGKLEKDLDRQI
ADYRKKHEILERKQTELDAITAQKVEILEKISGYSAEDAKNELVEAMKAEAKTKAQAHVQ
SILEEASLNAKQEAKKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRAL
ESATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTKKQIE
EEIIEVGKRTIIDLGIHGLHPELVKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGL
NVKLAKRAGLLHDIGKVPEQESELPHALLGMQWAERYGENAEVINAIGAHHDEIEMTSLL
SPIIQVADAISGARPGARRQVLESYIQRLKDLEAAALSFDGVSSAYAIQAGRELRVMVES
GKVNDEQSAQLSYDISEKIQNELTYPGQVRITVIRETRAVNIAR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactatcgctattattatcggcattgttggtcttgcaatcggtaccgcaatc
ggaatgtttctttccaaaagctcgctgaacaccaaggcaaaattcatcatcgacgatgcg
aagaaaaatgctgaaaaccttatagaaaaagctactgtacaggcagaagctgtgaagaaa
gaaaaacaccttcaggcaaaagaaaaattccttgaactgaagtcgcaacatgacgccgac
attcagcagcgtgaaaagaaaatgcaggaagccgagaaacgcaccaaagacaaggaaagc
aaactcaacgacgagctgagcaaaacaggcaaactcgaaaaagacctcgacagacaaatt
gccgactaccgtaagaaacacgaaatcctcgaaagaaaacaaaccgaactcgacgcgatt
accgcacagaaagttgaaatcttagagaaaatttccggatactccgctgaagacgccaaa
aacgaactggtggaagcaatgaaggcagaagccaaaacgaaagcgcaagctcacgtacaa
agcattctggaagaagccagcctcaacgcaaaacaggaagccaagaaaatcgtcatccag
accattcagagaatcggtacggaacaggcgatcgaaaactcagtttccgttttcaacatt
gaatctgatgaggtgaaaggtagaatcatcggtagagaaggacggaacattcgtgctttg
gaatccgcgacaggtgtcgaaatcattgttgacgacactcctgaagcaatcttgttatct
tgtttcgatccggttagaagagaaatcgcacggctttctttgcatcgcttggtaaccgac
ggacgaatccaccccgcaagaatcgaggaagtggtagaaaaaaccaaaaaacagatcgag
gaagaaatcatcgaagtgggtaaaagaaccatcatcgatttgggaatccacggtcttcac
ccagaacttgtgaaaattgtaggtagaatgaaataccgttcttcttacgggcaaaacttg
cttcaacactctagagaagttgccaatattgccgcaacgatggctgcagaactcggacta
aacgtgaaacttgcgaaaagagcgggtcttcttcacgacatcggaaaagttccggagcag
gaatcagaacttcctcacgctttactcggtatgcagtgggcggaaagatatggtgaaaat
gccgaagtaatcaacgcgatcggagcacaccatgacgagattgaaatgacctcgcttctt
tcaccaattatccaggttgcagatgcaatttccggagcgagaccaggagcaagaagacaa
gttttggaatcctatatccaaagattgaaagatttggaagcagcggctttaagcttcgac
ggagtttccagcgcatacgcaattcaggcaggacgcgaactccgagtgatggtggaaagt
ggaaaagtaaacgacgaacagagcgcgcaactttcctacgacatctcagaaaaaatccag
aacgaactgacttatccaggacaggttagaatcactgtgatccgcgaaacaagggcggtg
aatatcgcgagatag
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