Corynebacterium suranareeae: N24_1275
Help
Entry
N24_1275 CDS
T07007
Name
(GenBank) cold shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
csur
Corynebacterium suranareeae
Pathway
csur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N24_1275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csur03019
]
N24_1275
03009 Ribosome biogenesis [BR:
csur03009
]
N24_1275
Enzymes [BR:
csur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N24_1275
Messenger RNA biogenesis [BR:
csur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N24_1275
Ribosome biogenesis [BR:
csur03009
]
Prokaryotic type
rRNA helicases
N24_1275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
UvrA_inter
CMS1
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAU95537
UniProt:
A0A160PNM0
LinkDB
All DBs
Position
1359681..1361858
Genome browser
AA seq
725 aa
AA seq
DB search
MSNTENVNGDVEQPNNVISSESQETPQGDSASADFALETPTNNVEDASASKGSEEITRVA
ETSEDADSAQADNASNVINENEDSSEGDNQPSTESSSTEAKSGFDVLGLPERVLNAVRKV
GYETPSPIQAQTIPILMEGQDVVGLAQTGTGKTAAFALPILSRIDKSVRSPQALVLAPTR
ELALQVADSFQSFADHVGGLNVLPIYGGQAYGIQLSGLRRGAHIVVGTPGRIIDHLEKGS
LDISGLRFLVLDEADEMLNMGFQEDVERILEDTPEEKQVALFSATMPNGIRRLSKQYLNN
PAEITVKSETRTNTNITQRFLSVAHRNKMDALTRILEVTEFEAMIMFVRTKHETEEVAEK
LRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVERISHVLNYDIPN
DTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERATNAPLHEMDLPTVDQVNDFRK
VKFADSITKSLEDKQIDLFRSLVKEYSQTNDVPLEDIAAALATQAQSGDFLLKELPPERR
ERNDRRRDRDFDDRGDRGGRGRDRGDRGSRFDRDDENLATYRLAVGKRQHIRPGAIVGAL
ANEGGLNSKDFGRITIAADHTLVELPKDLPQSVLDNLRDTRISGQLINIERDSGGRPPRR
FERDDRGGRGGFRGRDRDDRGGRGGFRGRDRDDRGGRGGFRGRDRDDRGDRGDRGGRGGY
RGGRD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccgagaacgtcaacggcgacgtagaacagccgaataacgtcatttcgtcg
gaatctcaggaaaccccgcagggtgactcagcatcagctgacttcgctctcgagacccca
accaacaatgttgaagatgcatctgcatctaagggtagcgaagagatcaccagggttgcg
gaaacttctgaggacgccgactctgcacaagcagacaacgcgagcaatgtaatcaatgag
aatgaggactcctcggaaggcgataaccagccttcaaccgagtcatcctctacggaagcc
aagtccggcttcgatgtactcggactgccagagcgtgtattaaacgctgtgcgcaaggtg
ggttacgaaactccttccccaattcaggcacaaaccatcccgatcctcatggagggccag
gatgttgttggtctagcacagaccggtaccggtaagaccgcagctttcgcgctgccaatc
ctttcccgtattgacaagtccgtgcgcagcccacaggcacttgtgcttgcccctacccgc
gagctagcacttcaggttgctgactccttccaatctttcgctgaccacgtcggaggcctt
aacgtcctgccaatctatggtggacaggcttacggcattcagctttctggcctgcgtcgc
ggcgctcacatcgttgtgggcaccccaggccgtatcatcgaccacttggaaaagggctca
ctggatatctccggtctgcgtttcctcgtactcgatgaagcagatgagatgctgaatatg
ggcttccaagaagatgtcgagcgcatcctcgaagacaccccagaagaaaagcaggttgca
ctgttctccgcaacgatgccaaacggtattcgtcgcctctccaagcagtacctcaacaac
ccagctgaaatcaccgttaagtccgaaaccaggactaacaccaacatcacccagcgattc
ctgtctgttgcacaccgcaacaagatggatgcactgacccgcatcctcgaagtcaccgag
ttcgaagcaatgatcatgttcgtgcgcaccaagcacgaaactgaagaagttgctgaaaag
cttcgtgcacgcggattctccgcagcagcaatcaacggcgacattgctcaggcacagcgt
gagcgcaccgttgaccagctcaaggatggccgcctggacattcttgttgctaccgacgtt
gcagcccgtggcctcgacgttgagcgcatctcccacgtgcttaactacgacattccaaac
gataccgagtcttacgttcaccgcattggccgtaccggccgtgcaggacgtaccggcgag
gcaatcctgtttgtcaccccacgtgagcgccgtatgctccgctccatcgagcgcgcaacc
aacgcaccactgcacgaaatggatctgccaaccgttgatcaggtcaacgacttccgcaag
gttaagttcgctgactccatcaccaagtccctagaggataagcagatcgacctgttccgc
agcttggtcaaggaatactcccagaccaacgatgttccacttgaggacattgcagcggca
ctagcaactcaggcacagtccggtgacttcctgctcaaggagctcccaccagagcgccgt
gagcgcaacgatcgccgccgtgaccgtgactttgatgatcgtggcgaccgcggaggacgt
ggacgcgaccgtggagatcgtggctcccgcttcgaccgtgacgatgagaacctggcaacc
taccgcctcgcagtaggcaagcgtcagcacatccgcccaggtgccatcgttggtgcactg
gccaacgaaggtggactcaattccaaggacttcggccgcatcaccatcgctgctgatcac
accctggttgagctgccaaaggacctcccacaaagcgttcttgacaacctgcgcgatacc
cgcatctccggccaattgatcaacatcgaacgcgactccggtggacgcccaccacgccgc
ttcgagcgtgatgatcgtggcggacgcggaggtttccgtggacgtgaccgtgatgatcgt
ggcggacgcggaggtttccgcggacgtgaccgtgatgatcgtggtggacgcggtggattc
cgtggacgcgatcgcgatgaccgtggagatcgcggcgatcgtggtggccgtggcggctac
cgtggtggacgcgactaa
DBGET
integrated database retrieval system
