Chromobacterium subtsugae: U6115_00120
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Entry
U6115_00120 CDS
T11179
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csut Chromobacterium subtsugae
Pathway
csut01501
beta-Lactam resistance
csut01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U6115_00120
01503 Cationic antimicrobial peptide (CAMP) resistance
U6115_00120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csut02000
]
U6115_00120
01504 Antimicrobial resistance genes [BR:
csut01504
]
U6115_00120
Transporters [BR:
csut02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
U6115_00120
Antimicrobial resistance genes [BR:
csut01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U6115_00120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WSE91675
LinkDB
All DBs
Position
complement(27994..31137)
Genome browser
AA seq
1047 aa
AA seq
DB search
MFSSFLIRRPIFACVLSLIIMLAGVAAMGVLPVEQYPQIVPPQVQVVASYPGASAEVIAN
TVAAPLEQAINGVDDMLYVQSISASNGQLTLNATFKIGTSPDQATINVNNRVQSALAQLP
EEVRRQGVSVRKQSAAFLQVIALYAEKGRYDTLYMSNYALLNVVDELKRIPGVGDVINFA
GRDYSMRIWLKPDRLAQLKLTPSDVVAAIREQNAQFAAGKLGAEPSNQALDFTYTVTTRG
RMSTPEEFSNIIVRANPDGSAVLLKEVAKVELGALNYDFNGKINGDPMAPIGIFLAPGAN
QLETAKAVKDTMARLSGRFPDGLKYRIPFDSTKFVEVSIEEVYKTLAEAMALVFLVVFLF
LQNWRATLIPCLAVPVSIVGTFAGMYAFGFSINLLTLFGMVLAIGIVVDDAIVVLENVER
IMSEAKVSATEATLQAMKEVSGPVVAIVLVLCSVFVPVAFLGGIAGQMYKQFAITIAISV
SISGLVALTLTPALCALILRPGHQSRNRFFDWFNRNFDAVGGRYVRGVAFLSRRSALGLA
LFGLLLLVSAWLFRAIPTSLAPDEDQGYVIAAAFLPDGASLQRTAKVMDKLDHLVSRNPA
VKDMLSMSGFDIVTGGKKTNAGVSFIQLQPWEERRGAAQSAQAVVGDIFAKTGAGIRDGF
IFAVNPPPISGMSNTGGFEGYLQNRNGASPAELEGVSRQFLAAAAKRPELAGVQTTYSAS
VPQVYIELNRAKAKALGVPINTVFDTLQSTLGELYVNDFNKFGRTFRVQLQSEASYRSHS
DNLAKVFVRSTSGAMVPVTALLDIQRSTGPEVLERYNLYPSAKLIGGPAPGYSSGEALAA
MEQVAKETLPDGYALAWTGSALQEKAAGGSSAKVFLFGIVVVFLILAAQYERWTLPLAVL
LAVPFAVFGALVANWTRGLANDIYFQVALVTLIGLSAKNAILIVEFAMLKLDEGMELVQA
TMQAARMRFRPIVMTSLAFVLGCVPLAVSSGAGSASRHSIGTGVIGGMLAATFIATFFIP
LFFILIMKAFHKKAPAAAAAEEEVLNV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctcctttttgatccgccgaccgatcttcgcctgtgtgctctcgctgatcatc
atgctggcgggggtggcggcgatgggcgtgctgccggtcgagcagtacccgcagatcgtg
ccgccgcaagtacaggtggtggcaagctatcccggcgcctcggccgaggtgatcgccaat
accgtggccgcgccgcttgagcaggcgatcaacggcgtcgacgacatgctgtacgtgcag
tccatcagcgccagcaacggccagttgacgctgaacgccacgttcaagatcggcaccagt
ccggaccaggccaccatcaacgtcaacaaccgcgtgcagtcggcgctggcgcagctgccg
gaagaggtacggcgccagggcgtatcggtgcgcaagcagtctgcggcgttcctgcaggtg
atcgcgctgtacgcggagaaggggcgctacgacaccctgtacatgagcaactacgcgctg
ctcaacgtggtggacgaactcaagcgcattcccggcgtcggcgacgtgatcaacttcgcc
ggccgcgactattcgatgcggatctggctcaagcccgatcgcctggcgcagttgaagctg
acgcccagcgacgtggtcgccgccatccgcgagcagaacgcgcagttcgccgccggcaag
ctgggcgccgagcccagcaaccaggcgctggactttacctacaccgtcaccacccgcggg
cggatgagcacgccggaggagttttccaacatcatcgtgcgggccaatccggacggctcg
gcggtattgctcaaggaggtggccaaggtggagctgggcgcgttgaactatgacttcaac
ggcaagatcaacggcgatccgatggcgccgatcgggattttcctggcgccgggcgccaat
cagctggaaacggccaaagcggtcaaggacacgatggccaggttgtccggccgcttcccc
gacggtctgaaataccgcatcccgttcgattccaccaagtttgtcgaggtgtcgatcgag
gaagtgtacaaaacgctggccgaagcgatggcgctggtattcctggtggtgttcctgttc
ctgcagaactggcgcgccacgctgatcccgtgcctggcggtgccggtgtccatcgtcggc
actttcgccggcatgtacgccttcggcttctccatcaacctgttgacgctgttcggcatg
gtgctggccatcggcatcgtggtggacgacgccatcgtggtgctggaaaacgtcgagcgc
atcatgagcgaggcgaaggtttccgccaccgaggccaccctccaggcgatgaaagaagtg
tccgggccggtggtggccatcgtgctggtgttgtgctcggtattcgtgccggtggctttc
ctcggcggcatcgccggccagatgtacaagcagttcgccatcaccatcgccatttcggtc
agcatttccggcctggtggcgctgacgctgaccccggcgctgtgcgcgctgatcctgcgg
ccggggcaccagagccgcaatcgcttcttcgactggttcaaccgcaacttcgacgccgtg
ggcggccgctacgtgcgcggcgtggcgttcctgtcgaggcgcagcgcgctgggcctggcg
ctgttcggcctgctgttgctggtgtcggcatggctgttccgcgccatccccaccagcctg
gcgccggatgaggatcagggttatgtgatcgcggcggctttcttgcccgacggcgcatcc
ttgcagcgcaccgccaaggtgatggacaagctggaccatctggtttcgcgcaatcccgcg
gtgaaggacatgctgtcgatgtccggcttcgacatcgtcaccggcggcaagaagaccaat
gccggcgtctccttcatccagctgcagccctgggaggaaaggcgcggcgcggcgcagtcg
gcgcaagcggtggtcggcgacatcttcgccaagaccggcgccggcatccgcgacggcttc
attttcgcggtcaatccgccgccgatctccggcatgtccaataccggcggttttgaaggc
tatctgcagaaccgcaacggcgcgtcgccggccgagctggaaggcgtgtcgcggcaattc
ctcgccgccgcggccaagcggccggagctggccggcgtgcagaccacctattcggcgtcg
gtgccgcaggtgtatatcgagctgaaccgggccaaggccaaggcgctcggcgtgccgatc
aacaccgtgttcgataccctgcaaagcacgctgggcgagctgtacgtcaacgacttcaac
aagttcggccggactttccgcgtgcagctgcagtcggaagcctcctaccgcagccacagc
gacaacctggccaaggtcttcgtgcgctccacctctggcgccatggtgccggtgacggcg
ctgctggacatccagcgcagcaccggtccggaagtgctggagcgctacaacctgtatccg
tcggccaagctgatcggcggcccggcgccgggctacagctcgggcgaggcgctggcggcg
atggagcaggtggccaaggaaacgctgcccgacggctacgcgctggcctggaccggcagc
gcgctgcaggagaaggcggccggcggctcctccgccaaggtgttcctgttcggcatcgtc
gtggtgttcttgatcctggcggcgcagtacgaacgctggaccctgccgctggcggtgttg
ctggccgtgccgttcgcggtgttcggcgcgctggtggccaactggacgcgcggcctcgcc
aacgacatctacttccaggtggcgctggtgacgttgatcggcttgtcggccaagaacgcc
atcctgatcgtggaattcgcgatgctcaagctggacgagggcatggagttggtgcaggcg
accatgcaggcggcgcgcatgcgcttccgccccatcgtgatgacgtcgctggcctttgtg
ctgggttgcgtgccgctggccgtttccagcggcgccggctccgccagccgccactcgatc
ggcaccggcgtgatcggcggcatgctggccgccactttcatcgccaccttcttcattccc
ttgttcttcattctgatcatgaaggcattccataaaaaagccccggcggctgcggcggcc
gaggaggaggtgctcaatgtttaa
DBGET
integrated database retrieval system
