Chromobacterium subtsugae: U6115_16775
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Entry
U6115_16775 CDS
T11179
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csut Chromobacterium subtsugae
Pathway
csut01501
beta-Lactam resistance
csut01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U6115_16775
01503 Cationic antimicrobial peptide (CAMP) resistance
U6115_16775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csut02000
]
U6115_16775
01504 Antimicrobial resistance genes [BR:
csut01504
]
U6115_16775
Transporters [BR:
csut02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
U6115_16775
Antimicrobial resistance genes [BR:
csut01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U6115_16775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Phage_tail_terminator_5
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WSE90537
LinkDB
All DBs
Position
3506566..3509631
Genome browser
AA seq
1021 aa
AA seq
DB search
MNFTDIFIRRPVLATTVSLLIVVLGLRSLFGLPVNQYPRTQNAVVTISTAYYGADAKTVA
GFITQPLESAIAQAQGIDYLSSTSTSGVSTITATLRLNYDANRALTEINTQVNSVKNQLP
AQAQQPVLTVQTGQTTDAMYMGFYSDTLPTNNVTDYLVRVVKPKLDSVPGVQTAEILGAR
QFALRAWLDSAKMAAHGVTAADVSAALANNNTLTALGASKGQMVTIPLTAATDLHSVDEF
KQLAVKRNGDAIVRLEDVATVTLGSENYDFNVAFSGVRSVFIGIKVAPEANILDVAERVR
TVFPSIQQQLPTGLTGQIVYDSTDFINTSIHEVVKTLLEALVIVTVVIFLFLGSFRAVVV
PVIAMPLSLIGTFFIMLMLGYSINLLTLLALVLAIGLVVDDAIIVVENVDRHMREGKTPL
EAAIIAARELGGPILAMTVVLVAVYVPIGFQGGLTGALFTEFAFTLAASVTVSGVVALTL
SPMMCSRFFKSDMDNSPFVHAIDRTFERVRHRYQRILRSLLQTWPVLIVMGVILIALLGL
MFKMSKSELAPEEDQGIVLSQVVGAPTATADQMQAYADQVFQVGKSMPEYKQMFQITGVP
TTNAGIGGVLFKEWDQRKRSAHEIQLDLQARWNKIAGARVAAFQFPALPGASGLPVQFVI
TTTEPFENLNQVAQQVMDKARASGKFYFVDADLKIDKPQATVVVDRDKITALGLTQQDVG
NSLSAALGGGYVNYFSIDGRSYKVIPQVLQTDRLNPSQLLDYYIKTPNSGVIPVGTVAKL
KYDVVPESITRFQQLNSVTISGVAGVSQGEVLQFMRDTVQQVAPSGYTVDYSGQSRQFMQ
ESGGFLVTMMFAVIIVFLALAALFESFRDPVVILVSVPLALFGAMIFIFLGFSSLNIYTE
VGLVTLMGLISKHGILIVEVANELRKTGLSKQDAIEQAAAIRLRPILMTTAAMVFGVIPL
VIASGAGAAGRYAMGLVIFTGLSIGTLFTLFVVPAMYMFLASKRETAVETAGDAALENQP
R
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaactttaccgatatcttcatccgacggccggtgctggccaccacggtgagcctgctc
atcgtggtgctgggcctgcgctcgttgttcggcctgccggtcaaccagtatccgcgcacg
caaaacgcggtggtgaccatctccaccgcctattacggcgccgacgccaagaccgtggcc
ggcttcatcacccagccgctggaatccgccatcgcccaggcgcagggcatagactacctg
tcgtccaccagcaccagcggcgtgtccaccatcaccgccacgctgcggctgaactacgac
gccaaccgcgcgctgaccgagatcaacacccaggtcaactcggtgaagaaccagctgccg
gcccaggcgcagcagccggtgctgacggtgcagaccggccagaccaccgacgcgatgtac
atgggcttctacagcgacacgctgccgaccaacaacgtcaccgactacctggtgcgggtg
gtcaagcccaagctggactcggtgccgggggtgcagacggcggaaatcctgggcgcgcgc
cagttcgcgctgcgcgcctggctggattcggccaagatggcggcgcacggcgtcaccgcg
gccgacgtcagcgccgcgctggccaacaacaacacgctgaccgcgctgggcgccagcaag
ggccagatggtgaccatcccgctgaccgccgccaccgacctgcattcggtcgacgaattc
aagcagctggcggtcaagcgcaacggcgacgccatcgtgcggctggaggacgtggccacc
gtgacgctgggttcggaaaactatgatttcaacgtcgcgttcagcggcgtgcgctcggtg
ttcatcggcatcaaggtggcgccggaggccaacatcctggatgtggccgaacgcgtgcgc
acggtgttcccgtccatccagcagcagctgcccaccggcctgaccggccagatcgtctac
gactccaccgacttcatcaacacctccatccacgaggtggtgaagacgctgctggaggcg
ctggtgatcgtgaccgtggtgatcttcctgttcctcggcagcttccgcgcggtggtggtg
ccggtgatcgcgatgccgctgtcgctgatcggcaccttcttcatcatgctgatgctgggc
tactcgatcaacctgctgacgctgctggcgctggtgctggccatcggcctggtggtggac
gacgccatcatcgtggtggaaaacgtcgaccgccacatgcgcgagggcaagacgccgctc
gaagccgccatcatcgccgcgcgcgagctgggcggcccgattctggcgatgacggtggtg
ctggtggcggtgtacgtgccgatcggcttccagggcggcctgaccggcgcgctgttcacc
gaattcgccttcacgctggccgcctcggtcaccgtgtccggcgtggtggcgctgacgctg
tcgccgatgatgtgttcgcgcttcttcaagtcggacatggacaacagccccttcgtccac
gccatcgaccgcaccttcgaacgcgtgcgccaccgctaccagcgcatcctgcgcagcctg
ctgcagacctggccggtgctgatcgtgatgggcgtgatcctgatcgcgctcttgggcctg
atgttcaagatgtcgaagtcggagctggcgccggaagaggaccagggcatcgtgctgtcg
caggtggtgggcgcgcccaccgccaccgccgaccagatgcaggcctacgccgaccaagtg
ttccaggtgggcaagagcatgccggaatacaagcagatgttccagatcaccggcgtgccc
accaccaacgccggcatcggcggcgtgctgttcaaggaatgggaccagcgcaagcgcagc
gcgcatgaaatccagctggacctgcaggcgcgctggaacaagatcgccggcgcgcgcgtg
gcggccttccagttccccgccctgcccggcgcgtccggcctgccggtgcagttcgtcatc
accaccaccgagccgttcgagaacctgaaccaggtggcgcagcaggtgatggacaaggcg
cgcgcctccggcaagttctacttcgtcgacgccgacctgaaaatcgacaagccgcaggcg
acggtggtagtggaccgcgacaagatcaccgcgctgggcctgacccaacaggacgtcggc
aactcgctgtctgcggcgctgggcggcggctacgtcaactacttctcgatcgacggccgc
tcctacaaggtgattccgcaggtgctgcaaaccgaccggctgaatccatcccagctgctg
gattactacatcaagacgccgaacagcggcgtgatcccggtgggcaccgtggccaagctg
aaatacgacgtggtgccggagtcgatcactcgcttccagcagctcaattcggtgaccatc
tccggcgtggccggcgtgtcgcagggcgaagtgctgcagttcatgcgcgataccgtgcag
caggtcgcgcccagcggttacaccgtcgactactccggccagtcgcgccagttcatgcag
gagtccggcggcttcctggtgacgatgatgttcgcggtgatcatcgtgttcctggcgctg
gcggcgctgttcgaaagcttccgcgacccggtggtgatcctggtgtcggtgccgctggcg
ctgttcggcgcgatgatcttcatcttcctcggtttctcctcgctcaacatctacaccgag
gtggggctggtgacgctgatgggcctgatcagcaagcacggcatcctgatcgtggaagtg
gccaacgagctgcgcaagaccggcttgtccaagcaggacgccatcgagcaggctgccgcc
atccggctgcgcccgatcctgatgaccaccgccgcgatggtgttcggcgtgattccgctg
gtgatcgcctccggtgccggcgccgccggccgctacgcgatgggcctggtgatcttcacc
ggcctgtccatcggcacgctgttcacgctgttcgtggtgccggcgatgtatatgttcctg
gcctccaaacgcgaaaccgccgtggaaaccgccggcgacgccgcgctggaaaaccagccg
cgctaa
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integrated database retrieval system
