Cucumis sativus (cucumber): 101205556
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Entry
101205556 CDS
T02486
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101205556
09123 Folding, sorting and degradation
03018 RNA degradation
101205556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101205556
03041 Spliceosome [BR:
csv03041
]
101205556
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101205556
mRNA degradation factors
5'-3' decay
Lsm complex
101205556
Spliceosome [BR:
csv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101205556
Complex C
U2 snRNP components
101205556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
DUF150_C
DUF1256
Motif
Other DBs
NCBI-GeneID:
101205556
NCBI-ProteinID:
XP_004135926
UniProt:
A0A0A0K9T1
LinkDB
All DBs
Position
7:complement(19712438..19714566)
Genome browser
AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDVELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttctcgtacttcaaggatttggtgggcagagaggtgacagttgagttgaag
aacgacctagcaattagaggaactctgcattctgtagatcagtatctcaacatcaaactg
gaaaacaccagggttgttgatcaggaaaaataccctcatatgctttctgtgagaaactgt
ttcatcaggggatcagtggtgagatatgttcaacttccaccagatggtgttgatgtcgag
ttgttgcatgatgccaccagacgcgaggctcgaggtggctaa
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