KEGG   Cucumis sativus (cucumber): 101207786
Entry
101207786         CDS       T02486                                 
Name
(RefSeq) RNA polymerase sigma factor sigA
  KO
K03086  RNA polymerase primary sigma factor
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101207786
Transcription machinery [BR:csv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     101207786
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 HTH_36
Other DBs
NCBI-GeneID: 101207786
NCBI-ProteinID: XP_004151855
UniProt: A0A0A0LQR2
LinkDB
Position
2:24048079..24051662
AA seq 508 aa
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSP
RYPSSNRHSQQCIKAVKEHVETPSSPIAEPWHNTTSWEDEETELKYTVEALLLLQKSMLE
KQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL
RPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPS
EDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL
QEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNC
LENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRER
VRQVGLVALEKLKKAAKTRKMEAMLLKH
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgatggcaacagctgcaataattgggcttggtgcagctaagaggctgttgaattcttca
tcctattattctgatttcacagaaaagattttgtatgctaatgactataggttgggacaa
actcaagtttcctcttcaaagagtgtggtaatagcaaaaagttcagctaacttctctcca
aggtatccgtcgtcgaatcggcactctcagcaatgcatcaaagctgtgaaggaacatgta
gaaactccatcttctccgatagcagagccgtggcataacaccacaagctgggaagatgaa
gaaactgagctgaaatatactgtggaggctcttcttttgctgcaaaagtccatgctggag
aagcaatggagtctatcttttgagcaaaccgtgtcaaccgatacacctaaagaaaagacg
ctgaagaaagtacccgtcacttgttctggtgtgtctgcacggcaaaggagaatgagttct
aaaaggaaaatacagagtaaacatgtttttatggctcaaccaaaaatcagcaaacagttg
agacctaccattagtcctgagctactccaaaatcgattaaagggctatgtgaaaggtcta
ttgagtgaagagttactttctcatgccgaggttgttcgcctttcgaagaaaattaaggtt
ggtctcacattggaggagcgtaaaaccagactgaagcaaagactaggatgtgagccctct
gaagaccaactagcaatatcacttaagatttctcgtgccgaattacgatcaagaatgatg
gaaagttccttggcaagagagaagctagcgatgagcaatgttcgtttggtaatgtctatt
gcacaaagatatgataacatgggagctgaaatggcggacttggttcagggcggcttgatt
ggacttctccgtgggattgagaagtttgattcttcaaaggggtttaaaatctcaacctat
gtgtattggtggatacggcagggtgtttcaagagcattagttgagaattcaagaacgctg
agattgcctacacatttgcacgaaagattaggattgattcgcaatgccaaagttaaactg
caagagaaaggaatcactccatcacttgataggattgcagaatccctcaacatgtccaaa
aagaaagtccagaatgccacagaggcaatcagcaaggtgttttcgctcgaccgagaagca
ttcccttcattgaatggtcttcctggcgaaacccatcacagctatatcgcagataactgc
cttgagaacaacccatggcatggaacagacacatggattctgaaggttgaggttaaccaa
ctcataaatatgacactcggggaccgagaaagagagatcatacgcctttaccatggtctg
gataatgaatgtcttacatgggaggaaataagcaaacgcatagggttgtccagagaaaga
gtaaggcaagttggattggtggcactggagaaactaaagaaggcagccaagacaaggaag
atggaagccatgttgcttaaacattaa

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