Cucumis sativus (cucumber): 101207786
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Entry
101207786 CDS
T02486
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101207786
Transcription machinery [BR:
csv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
101207786
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_36
Motif
Other DBs
NCBI-GeneID:
101207786
NCBI-ProteinID:
XP_004151855
UniProt:
A0A0A0LQR2
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Position
2:24048079..24051662
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AA seq
508 aa
AA seq
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MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSP
RYPSSNRHSQQCIKAVKEHVETPSSPIAEPWHNTTSWEDEETELKYTVEALLLLQKSMLE
KQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL
RPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPS
EDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL
QEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNC
LENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRER
VRQVGLVALEKLKKAAKTRKMEAMLLKH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaacagctgcaataattgggcttggtgcagctaagaggctgttgaattcttca
tcctattattctgatttcacagaaaagattttgtatgctaatgactataggttgggacaa
actcaagtttcctcttcaaagagtgtggtaatagcaaaaagttcagctaacttctctcca
aggtatccgtcgtcgaatcggcactctcagcaatgcatcaaagctgtgaaggaacatgta
gaaactccatcttctccgatagcagagccgtggcataacaccacaagctgggaagatgaa
gaaactgagctgaaatatactgtggaggctcttcttttgctgcaaaagtccatgctggag
aagcaatggagtctatcttttgagcaaaccgtgtcaaccgatacacctaaagaaaagacg
ctgaagaaagtacccgtcacttgttctggtgtgtctgcacggcaaaggagaatgagttct
aaaaggaaaatacagagtaaacatgtttttatggctcaaccaaaaatcagcaaacagttg
agacctaccattagtcctgagctactccaaaatcgattaaagggctatgtgaaaggtcta
ttgagtgaagagttactttctcatgccgaggttgttcgcctttcgaagaaaattaaggtt
ggtctcacattggaggagcgtaaaaccagactgaagcaaagactaggatgtgagccctct
gaagaccaactagcaatatcacttaagatttctcgtgccgaattacgatcaagaatgatg
gaaagttccttggcaagagagaagctagcgatgagcaatgttcgtttggtaatgtctatt
gcacaaagatatgataacatgggagctgaaatggcggacttggttcagggcggcttgatt
ggacttctccgtgggattgagaagtttgattcttcaaaggggtttaaaatctcaacctat
gtgtattggtggatacggcagggtgtttcaagagcattagttgagaattcaagaacgctg
agattgcctacacatttgcacgaaagattaggattgattcgcaatgccaaagttaaactg
caagagaaaggaatcactccatcacttgataggattgcagaatccctcaacatgtccaaa
aagaaagtccagaatgccacagaggcaatcagcaaggtgttttcgctcgaccgagaagca
ttcccttcattgaatggtcttcctggcgaaacccatcacagctatatcgcagataactgc
cttgagaacaacccatggcatggaacagacacatggattctgaaggttgaggttaaccaa
ctcataaatatgacactcggggaccgagaaagagagatcatacgcctttaccatggtctg
gataatgaatgtcttacatgggaggaaataagcaaacgcatagggttgtccagagaaaga
gtaaggcaagttggattggtggcactggagaaactaaagaaggcagccaagacaaggaag
atggaagccatgttgcttaaacattaa
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