Cucumis sativus (cucumber): 101218846
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Entry
101218846 CDS
T02486
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101218846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101218846
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
101218846
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
101218846
NCBI-ProteinID:
XP_031737571
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Position
3:complement(14291911..14301865)
Genome browser
AA seq
929 aa
AA seq
DB search
MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALLRG
NLVVRRQSLLPRVLSVAEGAAVCRKPFKPPCSSGYDERNNQLARRLWARKRFVPWGSLKP
ASSVIATNLFLPKAAENDAVEESVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRF
LRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLFRKTLQSISLLYTLLCQGFDGKPM
VKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLII
SYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDL
EEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFI
LRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHFVQSKNVKRAITEELKQAKILAYITA
LKKLCNHPKLIYDTIKSGSPGTSGLESCIRFFPPEMFSGRSGAWTGGDGAWVELSGKMHV
LARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFN
DLSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYR
FLSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIH
EKMNCSRCQNCYGRPEDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSP
LEEDLGNWGHHFDSTTVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNG
NNSRLNQNSRQKPFLLSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSM
HVTLKHKHSLGNYLPQKRMSDVSECDDFE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaagatgagattgtcccagcctctgattctagcgattcaagcgacgactac
atcgacattaatggtgaagcctttcaggatgaggacgacgaagaagaacaatcctccagt
ctttccccttcatctgacgaggatctaaaatcgaagaacgttgatgcccttttgagaggt
aacctggttgtgagaagacaatcgttgctcccaagagttctctcagttgcagaaggtgca
gcagtttgtagaaaaccttttaaacctccctgctcaagtggctacgatgaaagaaacaat
cagcttgcacgtcggctgtgggcacggaaacgatttgttccttggggctctttaaaacca
gcgtcatctgttattgccactaatttatttctcccaaaagctgctgagaatgatgcagtg
gaggaaagtgtaactctaccacctgggattgatcctttggtgttgtggcaacccgaagac
tctgagcttaatgtcacgaatttagcatcaataacagttgatccattgctagttcgtttc
cttcgccctcatcagagagaaggtgtacagttcatgtttgaatgtgtttccggactacat
aaggggacagacatatttgggtgcattctggcggatgatatggggttatttaggaaaaca
ttgcagtcgatcagtttgctgtatacccttctatgtcaaggttttgatggaaagccaatg
gttaaaaaggctatcattgttacacctactagtctcgtgagtaattgggaggctgaaatt
aagaagtgggttggtgaaagggttcaccttattgctctctgtgaaagttctagagaggac
gttgtctctagcattgacagctttgtacatcccaagagttctttacaggtgctgattatt
tcatatgagacattccgtatgcattcatcaaagttcagccaaagtgaatcatgtgattta
ctcatatgcgatgaggctcaccgactgaagaatgatcagacattgacaaatcgggcactg
gctgccctgtcttgcaggcgtagggttttgttatcaggaactccaatgcagaatgaccta
gaagagttctttgccatggttaactttaccaatccaggaattttgggtgatgtttcacat
ttccgtcgatattatgaggcaccaattatttgtgggagggaacctattgctaccgaggaa
gagaaaaagctaggtgctcaacgctcgactgaactaagtgaaaaggttaatcagtttatc
ctacggaggactaatgcactcttatcaaatcacttgccaccaaagatagttgaagtcatt
tgctgcaagttgagtcctcttcaagcagacctatataatcattttgtacagtcaaaaaat
gttaagcgggcaattactgaagagctaaagcaagctaagattttggcctacataactgca
cttaagaagctttgcaatcatccaaagcttatatacgatactataaaaagtgggagtcca
ggaacttcaggattagagagctgtattcggtttttccctccagagatgttctctggaagg
tctggtgcatggactggtggagatggggcttgggttgaattatcagggaaaatgcatgtc
ctagctaggttactagcccacttacgccagagaactgatgaccgtatcgttcttgtctca
aactacactcaaacgctagatttgtttgctcaactgtgtcgtgaaaggaggtacccgtat
ttaaggcttgatggaaccacatcaataagtaaaagacaaaagttagtcaaccgttttaat
gatctgtcaaaggatgagtttgtttttctattgagcagcaaggctggtggatgtggtctg
aatttgattggtggaaatcgtttagttctgtttgatcctgactggaaccctgcgaatgat
aagcaagctgctgcaagagtgtggagggacggacaaaagaagagagtattcatctacaga
tttttaagtaccggaacgattgaagaaaaggtgtaccagcgacaaatgtcaaaagaaggg
ttacaaaaagttattcagcaggagtcaacaaataaccttacgacccaggtgaacttcctt
tcatctgaggatttacgcgatttattctcatttcatgataacgtcaggtctgaaatccat
gaaaagatgaattgcagtcggtgccaaaattgttatggtaggcccgaggacatggacgaa
aacctgtctacaaacggaccttgtcagtctgaccaagtaacttctgacattggcggattt
gcacaacttgctggatgcttagacaagttaaagaaatcagagcaacaggtggggtctccg
ctagaagaagatttaggcaactgggggcatcattttgactctactaccgtacctgatacc
attttacaagcttctgctggtgatgaggttacctttgttttctcaaatcaagttgatgga
aagcttgtacccgtcgaatcgatgagtagtccgaggatgaaagatgcagagggaaatggg
aacaactccagattgaaccaaaactcaagacagaaaccatttttactatctcaacataga
aaacctttacaatccattacttctaatgaagatcccaacaaaggtacattaaaatttaca
tccactgtctttcaaagcgaaaccatgaagcctgttagaacttcagttgaaggttcaatg
catgtaacattgaagcacaaacactctcttggaaattacttaccacagaaaagaatgtct
gatgtttcggaatgtgatgatttcgagtaa
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