KEGG   Cucumis sativus (cucumber): 101222454
Entry
101222454         CDS       T02486                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03020  RNA polymerase
csv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101222454
  09124 Replication and repair
   03420 Nucleotide excision repair
    101222454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101222454
   03400 DNA repair and recombination proteins [BR:csv03400]
    101222454
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101222454
  RNA polymerase III system
   RNA polymerase III
     101222454
  RNA polymerase I system
   RNA polymerase I
     101222454
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101222454
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 101222454
NCBI-ProteinID: XP_004136650
UniProt: A0A0A0LCG9
LinkDB
Position
3:33148771..33152530
AA seq 227 aa
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSL
QQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHG
LILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQY
SIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCVW
NT seq 684 nt   +upstreamnt  +downstreamnt
atggaggaagatgggtttgaagcagagccgaatccagtggagttcggcacttgcttgagt
tcctacatcgacgatggaaccactgagagccatagatacttcctttctcgaagaacagtc
gtggagatgcttaaggaccgaggttacactatcaactcccccaatatcgacttctctctt
caacaatttcgagaaacttttggccaattccccgacgttgatcgcctaaaactatccgcc
gctcatcactccgatccctccaaaagagttcttgtagtgttctgtggaactggtgcagta
aaagttaatgctattcgcaatattgctggtcaaattgctaataaggatagtttgcatggt
ctcattttaattgtgcaaaatcaaattacaaaccaagccatgaaagcagttgagctcttc
tcgtttaaggttgaaatattccagattactgacttgctcgtcaacatcacaaagcatgct
ttaaagccaaaccatcaagtactgacggaggaagaaaaacaaaagcttttgaaacaatac
agtatagaagaaaaacagcttcctcgtatgttacgtacggatgctatagctcgatattat
gggctggagaaagggcaggttgtgaaagtgacttacgatggcgatatgactagggcacac
ataacttaccggtgtgtttggtga

DBGET integrated database retrieval system