Carlito syrichta (Philippine tarsier): 103270488
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Entry
103270488 CDS
T07836
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103270488 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103270488 (CNOT1)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103270488 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103270488 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
103270488
NCBI-ProteinID:
XP_008066191
Ensembl:
ENSTSYG00000006888
UniProt:
A0A1U7UK05
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcagtttctgattcaggagtgtgcgtcg
ttgattacaaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagtactcaag
ttaagcaaagtgcaagaggtgatttttggacttgccctgttgaattcttccagctccgat
cttagaggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gaacagatagacgcttttcttaagacgctgcgcagagattttccccaagaacgctgtcct
gtggtgctcgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattccggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgcgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttaggaatgatggctcgaact
cattcaggattaacagatggtattccattacagagtatctctgctcctggcagtgggatt
tggagtgatggaaaagataaaagtgatggagcacaggcacacacgtggaatgtagaagtc
ttgattgatgttctcaaagaattgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggatcatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttacggc
attcagagaggtttgggtatggaagtattcccggtagacctcatatatagaccttggaaa
catgcagaaggccagctctcctttattcagcattcccttataaatccagaaatcttctgt
tttgctgactatccctgccatactgttgccactgatattttgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctgaggctc
gcagaggttgggcagtatgagcaagtcaaacaactcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttactacaaattaacacctcctggcatactttacgtcat
gaactcatctccactctgatgccaattttccttggaaaccatcctaactcggctattatt
ttgcactatgcatggcatggacagggacagtctccctcaatccgccagcttatcatgcat
gcaatggcagagtggtacatgagaggggagcagtatgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgccgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacggataaaattcgagagcatggggagccttttatccaggcatgtatgactttttta
aagagacggtgcccttctatcttgggtggacttgccccagagaaagaccagcccaagagt
gctcaacttcctccagagactctggcgacaatgttggcttgtctacaggcttgtgcgggg
agtgtttctcaggagttatcagaaactatcctcaccatggtagccaattgtagtaatgtt
atgaataaggccagacagccaccacctggagttatgccaaaaggacgtcctcctagtgct
agcagcttagatgccatttctcctgttcagattgatcctcttgctggaatggcatctctt
agtataggtggttcagctgccccacacacccagagtatgcagggttttcctccaaatctg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttcaacccca
aatcagacaactgccttcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggctcttggacttcctgcagtgaat
aacgacccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaatagctatttccagcgaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagagatttaaagactctact
ataaagagggaacgagaagtatttaactgtatgctaaggaacttatttgaagaataccgg
ttttttccccagtaccctgataaagaattgcatataacagcgtgtttatttggtgggata
attgagaaaggactggtcacttacatggcactcggtctggccttgagatatgtacttgaa
gccttacgcaaaccttttggatccaaaatgtattatttcggaattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcaacacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatattgagtatggacagcagtctagagat
cctcctgtgaaaatgcaaggctctatcacaacccctggaagtattgcgctggctcaggcc
caggctcaggcccaggttccagcaaaagctcctcttgctggtcaggttagcactatggta
accacctcaacaacaaccactgtcgctaaaacagttacagtgaccaggccaactggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacactgcttgtg
gccacagatcaaactgagagaattgtggagcccccagaaaatatccaagagaaaattgct
tttatcttcaacaatctctcacaatcaaacatgacacagaaggttgaagagctaaaggaa
actgtgaaagaagaatttatgccttgggtttcacagtatctggttatgaagagagtcagt
attgaaccaaactttcacagcctatattcaaacttccttgacacactgaagaatcctgaa
tttaacaagatggttttgaatgagacctacagaaacatcaaagtgctcctgacttctgac
aaagctgcagccaatttctcagatcgttctttgctgaagaatttaggacattggctagga
atgattacattagcaaaaaataaacccatcttacacactgacttggatgtgaaatctttg
ctgctagaggcttatgttaaaggacaacaagaattgctctatgtagtgccctttgttgcc
aaagtcttagagtccagtattcgtagtgtggtttttaggccaccaaacccttggaccatg
gcaattatgaatgtattagctgagctacatcaggaacatgacttaaagttaaacttgaag
ttcgagattgaggtcctctgcaagaaccttgcattagatatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctaaagaacttagatgagcaactttctgctccaaag
aaagatgtcaagcagccagaagaacttcctcccattacaaccacaacaacttctactaca
ccagctaccaacaccacctgtacagccacagttccaccacagccgcagtacagctaccat
gacatcaatgtctattctcttgcgggtctggcaccacacattactctaaacccaacaatt
cccttgtttcaggcccatccgcagttgaagcagtgtgtgcgtcaagctattgaacgtgct
gtccaggaactggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gagcaaatagtcagaaaggactttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacttgcagggaacct
ttgctcatgagcatatctaccaacctgaaaaacagttttgcttcagcccttcgtactgct
tccccacaacaaagggaaatgatggatcaggcagctgcccagttagctcaggacaattgt
gaattggcttgctgttttattcagaagacggcagtagaaaaagcaggccctgaaatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtactcacatatcaagccgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagagtttgcccgaaatgtgcct
ggcttcttgcctacgaatgatttaagtcagcctacaggatttttagcccagcccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgcattacagaactggag
cagcacctacatgccatcccaccaactttggccatgaaccctcaagctcaggctcttcga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccattgctgctcttgga
ttgctccaaaaggctgtagagggcttactagatgccacaagtggtgctgatgctgaccta
ctgctgcgctacagggaatgccacctactggtcctaaaagctctgcaggatggccgggca
tatgggtctccatggtgcaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggctgtggagctgctaattcgtaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggaaaatggtttaaactacatggctgtggca
tttgctatgcaattagtaaaaatcctgctggtggatgaaagaagtgttgcccatgttact
gaggcagatctgttccacactattgaaaccctcatgaggattaatgctcattccagaggc
aacgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatatctcaagcctca
gagtacgatgaccctccaggcctgagggagaaggcagaatatcttctgagggaatgggtg
aatctctaccattcagcagctgctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacagatgcaccagcaaggaatattgaagactgatgatctcataacaaggttctttcgt
ctgtgtactgaaatgtgtgttgaaatcagttaccgtgctcaggctgagcagcagcacaat
cctgctgctaatcccaccatgatccgagccaagtgctatcacaacttggatgcctttgtt
cgactcattgcactgctagtgaaacactcaggggaggccaccaacactgttacaaagatt
aatctgctgaacaaggttcttggcatagtagtgggagttctcctgcaagatcatgatgtt
cggcaaagtgaatttcagcagcttccctaccatcgaatttttatcatgctgcttttggaa
ctcaatgcacctgagcatgtgttggaaactattaatttccagacacttacagctttctgc
aatacattccacatcttgagacctaccaaagctcctggctttgtatatgcctggcttgaa
ctgatctcccatcggatatttattgcaagaatgctggcacatacgccacaacagaaggga
tggcctatgtatgcacagctactgattgatttattcaagtacttagcgcctttccttaga
aatgtggaactcaccaaacctatgcaaatcctctataagggcaccttaagagtgctgctg
gtccttttgcatgatttccctgagttcctttgtgattaccattatgggttctgtgatgtg
atcccacctaattgtatccagttaagaaatttgatcctgagtgccttcccaagaaatatg
aggctcccagacccattcactcctaatctgaaggtggacatgttgagtgaaattaacatt
gcaccccggattctcaccaatttcaccggagtgatgccccctcagttcaaaaaggatttg
gattcctatcttaaaactcgatcgccagtcacttttctgtctgatctgcgcagcaaccta
caggtgtccaatgagcctggcaatcgctacaacctccagctcatcaatgcactggtgctc
tatgtagggactcaggccattgcacacatccacaacaagggcagcacgccttcaatgagc
accatcactcactcagcacacatggatatcttccagaacctggctgtggacttggacact
gagggtcggtatctcttcttgaatgcaattgcaaatcaactgcggtacccaaatagccac
actcactactttagctgcaccatgctgtacctttttgcagaggccaacactgaagctatc
caggaacagatcacaagggttctcttggaacggttgattgtaaataggccacatccttgg
ggtcttcttattaccttcattgaactgattaaaaatccagcgtttaagttctggaaccac
gagtttgtacactgtgccccagaaattgaaaagttattccagtcggtcgcacagtgctgc
atgggacagaagcaggctcagcaagtaatggaagggacaggtgccagttag
DBGET
integrated database retrieval system
