KEGG   Cronobacter sakazakii Sp291: CSSP291_00805
Entry
CSSP291_00805     CDS       T02461                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
csz  Cronobacter sakazakii Sp291
Pathway
csz02024  Quorum sensing
csz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CSSP291_00805 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CSSP291_00805 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csz03019]
    CSSP291_00805 (hfq)
   03036 Chromosome and associated proteins [BR:csz03036]
    CSSP291_00805 (hfq)
Messenger RNA biogenesis [BR:csz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CSSP291_00805 (hfq)
Chromosome and associated proteins [BR:csz03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CSSP291_00805 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AGE84761
LinkDB
Position
160906..161214
AA seq 102 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGSNNYHHSNNAQPSSAASQDSEDAE
NT seq 309 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatccgttcctcaacgcgctgcgtcgggaacgtgtt
ccagtttctatttatttggtgaatggtattaagctgcaaggtcagattgaatctttcgat
cagttcgtgatcctgttgaaaaacacggtcagccagatggtttataagcacgcgatctcg
accgtggtgccgtctcgtccggtttctcaccatagtaacaacgcgggtggcggttccaat
aactaccatcacagcaacaacgcacagccatcttccgctgcctctcaggatagcgaagac
gccgagtaa

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