Clostridium tetani E88: CTC_02578
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Entry
CTC_02578 CDS
T00112
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ctc
Clostridium tetani E88
Pathway
ctc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CTC_02578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctc03021
]
CTC_02578
03400 DNA repair and recombination proteins [BR:
ctc03400
]
CTC_02578
Enzymes [BR:
ctc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CTC_02578
Transcription machinery [BR:
ctc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CTC_02578
DNA repair and recombination proteins [BR:
ctc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CTC_02578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AAO37035
UniProt:
Q890R0
LinkDB
All DBs
Position
complement(2732872..2733819)
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECIEMTENGSYGKFVVEPLERGYGITLGNALRRILLSSLPGVAVNSIKIEN
VLHEFSTVKGVKEDVTEIILNIKLLALKMTGEGPKTIYIDAKGPGVVTAADIKTDSDVEI
INKDLHIATLDDDGKLYIEMTVDRGRGYVSQNRNKVEGMPIGTIPIDSIYTPVKRVNFTV
ANTRVGQITDYDKLTLEIWTNGTIMPDDAISLSAKILIEHFKLFMTLTDHADDVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERTVEDMMKVRNLGRKSLEEVE
QKLEALELGLKQSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaagccaaaaattgaatgtatagaaatgactgaaaatggatcctac
ggaaaatttgtagtggaaccattggaaagaggttatggtattactctaggcaatgcatta
aggagaatactcctttcttcattacctggagttgctgttaattctatcaaaatagaaaat
gtattgcatgaattttctacagttaaaggtgtcaaagaagatgtaacagaaataatttta
aatataaaattattagcattaaagatgacaggagagggaccaaaaactatttatattgat
gctaaaggaccaggagtggttactgcagcagatataaagacagatagtgatgtagagata
attaataaggatctacatatagcaacacttgatgatgacggaaaactatatatagaaatg
acagtagacagaggtagaggttatgtatctcaaaatagaaataaagtcgaaggaatgcct
ataggaacaattcctatagattctatatatactcctgttaaaagggttaatttcactgta
gcaaatactagagttggtcaaataactgattatgataagctaactcttgaaatttggact
aatggaacaataatgccagatgatgcaataagtttatcagctaaaatattaatagagcat
tttaaattatttatgactttaacagatcatgctgatgatgttgaaataatggtagaaaaa
gaagaagataaaaaagaaaaagtattagaaatgactatagaagaattagatttatctgtt
agaagttataattgcttaaaaagagcaggtattaatacagttcaagaattaacagaaaga
actgtagaagatatgatgaaggttagaaatctagggagaaaatccttagaggaagttgaa
caaaagctggaagctctagaattaggtttaaagcaaagtgaagagtag
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