Corynebacterium testudinoris: CTEST_00105
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Entry
CTEST_00105 CDS
T03956
Name
(GenBank) Excinuclease ATPase subunit
KO
K03701
excinuclease ABC subunit A
Organism
cted
Corynebacterium testudinoris
Pathway
cted03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTEST_00105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cted03400
]
CTEST_00105
DNA repair and recombination proteins [BR:
cted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTEST_00105
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CTEST_00105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
DnaJ_CXXCXGXG
Anti-TRAP
RNase_E_G_Thio
HypA
AAA_29
nSTAND1
AAA_16
DUF6212
AAA_25
DUF463
ATPase
DUF5351
AAA_22
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
AKK07492
UniProt:
A0A0G3H8J7
LinkDB
All DBs
Position
complement(19295..21460)
Genome browser
AA seq
721 aa
AA seq
DB search
MFSRLGSHQCPNGHRLAPTIDVAAGLELTCPVCGIVFDPPGAEDLAFNSEGACPTCSGTG
TVRDIDDDSLVPDPSKTIADGAVAPWGMFGLALMPRVVAEMGVRTDVPYYDLTEAEREVI
LDGSEEKRQILAPSKSGKLFDLSVTYRNARQAVREAMQNATSEKGLARVSRFITTHTCPT
CHGTRLSEKVRSTKLAGIDLAQASALTLDEAVAWVPTVIEELPSDMHPMARVIASQFAEM
ARRLVQLGLGYLTLDRASTSLSTGERQRVQLARAVRNETTGVLYVLDEPSVGLHPANLDG
LIGVMRDLLDGGNSVVMVDHDVQMLREADWMIEIGPGSGTEGGTILAQGDLPTVTADPSS
LIGPFLMGAENPIVRERASAENVFERGDLHLVTSSIHTVHALDVKIPQGRLTAVTGMSGS
GKTTLVLDSLIPALHSLHSDEPLPDHVVSLDTAGITHANVVDATPIGVNVRSTIATYSGI
LDDLRRAYAATDTATQAQLSAADFSYNTGSLRCPRCEGTGQVVLDVQFLPDVDIACPDCH
GTRYAPNADQYLLETTDGPRSLPALFAMTVRQAHGALGGRTKIQKKLQTLIDLGLGYLNL
SENTPALSGGEAQRLKLAGELSRDQSNTLFVLDEPSVGLHPLDTRVLIGVLDRLLAKGAT
IIVIEHDLDLIANADHIIDLGPGGGAAGGRIVATGTPEQVAANNSSITGRYLRSLLQIDA
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttctcccgcctggggtcgcaccagtgcccgaacggacaccggctcgcgcccacgatc
gacgttgcagcgggtctggagttgacgtgcccggtatgcgggatagtgttcgatccccca
ggggcggaggatctcgcattcaattccgagggcgcctgcccgacctgctccggcaccggc
acggttcgcgatatcgacgatgactccttggtaccggatccatcgaagacgatcgccgac
ggggcagttgctccgtgggggatgtttgggttggctttaatgccgcgagttgtcgccgag
atgggggtacgcaccgacgtgccctactacgacctaaccgaggcagaacgggaggtcatc
ctcgatgggtcggaggagaagcgacagatcctagcgccatccaaaagcgggaagctgttc
gacctgagcgtcacctatcgcaacgcgcgccaggctgtgcgcgaggcgatgcagaatgcc
acaagcgagaaaggcctcgcgcgcgtgagtcgcttcatcacgacccacacttgcccgacc
tgccacggcacgcgcctatctgaaaaggtgcgcagcacgaagctggcgggtatcgatctc
gcgcaggccagtgcgctcacgttggatgaagccgtcgcgtgggtaccgaccgtgatcgag
gaacttccttcggacatgcatccgatggcacgtgtgatcgcgagccagttcgccgagatg
gcccggcgtctcgtgcagctcgggctgggctaccttaccctcgaccgtgccagcacctca
ttgtcaaccggggagcggcagcgggtacaactggctcgggcggttcgcaacgagaccacc
ggggtgctgtacgtgctcgatgagccttccgtcgggttacacccagccaacctcgacggc
ttgattggagttatgcgagatcttcttgacggcggcaactccgtggtgatggtcgatcat
gacgtacagatgctgcgcgaggcggactggatgatcgagatcgggccgggttccggcacc
gagggcggcaccatcctcgctcagggcgacctgcctaccgtgaccgcagacccgtcctcc
ctgatcggcccgttcctgatgggagccgagaacccgatcgtgcgcgagcgggcgagcgcg
gagaacgtgttcgagcggggcgacttgcacctagtgacgtcgtcgatccacacggtgcac
gcgctggatgtgaagatcccgcagggccggctgacggcagtgacgggtatgtccggctcc
ggaaagaccaccttggtgctcgacagcctcatccccgcgcttcattccctccacagcgac
gaaccacttcccgaccacgtcgtctccctggatacagccggcatcacccacgcgaatgtg
gtggacgcgaccccgatcggggtgaatgtacgctccacaatcgcaacctactccggaatt
ctcgacgacctgcgccgcgcctacgccgccactgacaccgcgacgcaggctcagctaagc
gcagcggacttctcctacaacactggctcgctgcgatgcccgcgctgtgagggaaccggt
caagtcgttctcgacgtgcaattcttgcccgatgtcgacattgcctgccccgactgccac
ggcacccgatatgcacccaacgccgaccagtatctcctcgaaaccaccgacggcccccgc
tcgttgccagcgctgtttgcgatgaccgtacggcaagcgcacggtgccctcggcggacgg
acaaagatccagaagaagctccaaaccttgatcgatctgggtctgggctacctcaacctc
agcgagaacacgcccgcactatccggcggagaagcgcaacgcctcaaacttgcaggcgag
ctcagccgcgaccagtcaaataccctgttcgtgctcgacgagccctccgtcggcctgcac
ccgttggacacccgcgtgctcatcggcgtcctcgaccgtctcctcgccaagggcgcgacg
atcatcgtcatcgagcacgacctcgacctcatcgccaatgccgaccacatcattgacctg
ggccccggaggcggcgccgcaggcggacgcattgttgccaccggcacgcccgaacaggtc
gccgcgaacaacagcagcatcactggacgctacctgcgctccttactacagatagatgcc
tcctga
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