Corynebacterium testudinoris: CTEST_01930
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Entry
CTEST_01930 CDS
T03956
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cted
Corynebacterium testudinoris
Pathway
cted03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cted00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CTEST_01930 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cted03021
]
CTEST_01930 (rpoB)
03400 DNA repair and recombination proteins [BR:
cted03400
]
CTEST_01930 (rpoB)
Enzymes [BR:
cted01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CTEST_01930 (rpoB)
Transcription machinery [BR:
cted03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CTEST_01930 (rpoB)
DNA repair and recombination proteins [BR:
cted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CTEST_01930 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AKK07841
UniProt:
A0A0G3H358
LinkDB
All DBs
Position
388722..392285
Genome browser
AA seq
1187 aa
AA seq
DB search
MLILPADSTIVSQSNRHPREVLEGPILAVSRQTKSVTDIPGAPKRYSFAKISAPIEVPGL
LDLQRESFAWLIGTPEWRARHQEERGPEARVTSGLEDILDELSPIQDYSENMSLSLSEPR
FEPVKNSIDECKDKDINYSAPLYVTAEFINNETQEIKSQTVFIGDFPMMTPKGTFIVNGT
ERVVVSQLVRSPGVYFDQTIDKSTERPLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRR
QPVTVLLKALGWTTEQIQERFGFSEIMMSTLESDGVANTDEALLEIYRKQRPGEQPTRDL
ARSLLDNSFFRAKRYDLAKVGRYKVNRKLGLGGDHDGLMTLTEEDIATTLEYLVRLHVGE
RSMTSPTGEIIPVETDDIDHFGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESI
TPTSLINVRPVSAAIREFFGTSQLSQFMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEV
RDVHPSHYGRMCPIETPEGPNIGLIGSLASYARVNAFGFIETPYLKVVEGRVTDIVEYLT
ADEEDRYAIAQASIERDADGVITADRIEVRLKDGAIGVVTDGYGVDYIDVSPRQMVSVAT
AMIPFLEHDDANRALMGANMQRQAVPLVRAEAPYVGTGMEKRAAYDAGDMVITPKAGVVE
NVSADVITIMDDEGIRDTYLLRKFERTNQGTSYNQTPLVNMGERVEAGQVIADGPGTHNG
EMSLGRNLLVAFMPWEGHNYEDAIILNQRVVEEDILTSIHIEEHEIDARDTKLGAEEITR
EIPNVSEDVLRDLDDRGIVRIGADVRAGDILVGKVTPKGETELTPEERLLRAIFGEKARE
VRDTSMKVPHGENGKVIGVRRFAREDDDDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGN
KGVVGKILPPEDMPFMADGTPVDIILNTHGVPRRMNIGQVLEIHLGWLAAAGWSVDPEDP
KNAELIKTLPEELYDVPAGSLTATPVFDGATNEELSGLLANSRPNRDGDVMVDETGKTML
LDGRSGEPFPYPVSVGYMYLLKLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGE
MEVWAMQAYGAAYTLQELLTIKSDDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQS
LCLNVEVLSADGTPMELSGSDDDELDSAGSSLGINLSHDERSDADVS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgctaattttaccagcggattcgacgattgttagccagagcaatcgccacccgcgtgag
gtgctggaaggacccatcttggcagtctcccgccagaccaagtcagtgaccgacatcccc
ggagccccgaagcgatactctttcgctaagatctccgcgcccatcgaagttccgggtctt
cttgacctgcagcgtgaatccttcgcgtggctgatcggtacgcccgagtggcgtgcccgc
catcaggaggagcgtgggccggaagcccgcgtgaccagtggactcgaggatattctcgat
gagttgtcgccgattcaggactactccgagaacatgtcgttgtcgctgtccgagccgcgc
tttgagccggtgaagaactctattgatgagtgcaaggacaaagacattaactactctgcg
ccgctgtatgtgacggcagagttcattaacaatgaaacccaagagatcaagtctcagacg
gtgttcattggtgatttcccgatgatgacgccgaagggcacgttcatcgtcaacggcacg
gagcgtgtcgtggtctctcagctcgtccgttccccgggcgtctactttgaccagacgatc
gacaagtctacggagcgacccctgcactcggtgaaggtgattccttcccgcggtgcgtgg
ctcgaattcgacgtcgataagcgagacaccgtaggtgtccgcattgaccgtaagcgtcgc
cagccggtgacggtgctgctcaaggcccttggttggaccaccgagcagattcaggagcga
ttcggcttctctgagatcatgatgtccaccctcgagtctgatggtgtggccaacaccgat
gaggctttgctggagatctaccgcaagcagcgtccgggcgagcagcccacgcgcgacctt
gctcgttccctgctggacaactcgttcttccgtgcgaagcgctacgacctggctaaggtg
ggccgctacaaggtcaaccgcaagctcggcctgggcggcgaccacgacggtctgatgacg
ctgaccgaagaggacattgccaccaccctggaatacctcgttcgcctgcacgttggtgag
cgttccatgacctccccgaccggtgagatcattccggtggagaccgacgacatcgaccac
tttggtaaccgtcgtctgcgcaccgtcggtgagctgattcaaaaccaggtccgcgttggc
ctgtcccgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggatgctgagtcgatc
accccgacctcgctgatcaacgtccgtccggtctcggccgcgatccgtgagttcttcggt
acctcccagctgtcccagttcatggaccagaacaactcgctgtcgggtctgacccacaag
cgtcgtctgtccgcactgggcccgggtggcctgtcccgtgagcgcgctggcattgaggtc
cgcgacgttcacccgtctcactacggccgcatgtgcccgattgagaccccggaaggcccg
aacattggcctcatcggttcgctcgcgtcttacgctcgggtgaatgctttcggattcatt
gagaccccgtacctcaaggtcgttgaaggccgagtgaccgacatcgtcgagtacctcacc
gccgacgaggaggatcgctacgccattgcgcaggcctctatcgagcgcgacgctgacggc
gtcatcaccgctgaccgcattgaggttcgcctcaaggacggcgctatcggcgtggtcacc
gacggttacggtgtggactacatcgacgtatccccgcgccagatggtctctgtcgctacc
gcgatgattccgttcctcgagcacgacgatgcaaaccgtgccctcatgggcgcgaacatg
cagcgtcaggctgtgccgctggtccgcgctgaagctccgtacgtgggcaccggcatggaa
aagcgcgctgcttacgatgctggcgatatggtcatcaccccgaaggctggtgtggtggaa
aatgtctcggctgacgtcatcaccatcatggacgatgagggcatccgcgacacctacctg
ctgcgcaagttcgagcgcaccaaccagggcacgagctacaaccagaccccgctggtcaac
atgggcgagcgcgtcgaggctggtcaggttatcgccgacggccccggtactcacaacggt
gaaatgtccctcggccgtaacctcctggttgcgttcatgccgtgggaaggccacaactac
gaggacgcgatcatcctcaaccagcgtgtggtggaagaggacatcctcacctccatccac
atcgaggagcacgagatcgatgcccgcgacaccaagctcggtgccgaggaaatcactcgt
gagatcccgaacgtctccgaagatgtcctgcgcgacctcgacgaccgcggcattgtccgc
atcggcgccgacgtccgcgctggcgacatcctcgtcggcaaggtcaccccgaagggcgag
accgagctgaccccggaggagcgtttgctgcgcgccatcttcggcgagaaggcccgcgag
gtccgcgacacctccatgaaggtgccgcacggcgaaaacggcaaggtcattggtgttcgt
cgcttcgcccgcgaggacgacgacgatctggctcccggcgtgaacgagatgatccgcgtc
tacgtggctcagaagcgcaagatccaggacggcgacaagctcgccggccgccacggcaac
aagggcgtcgtgggcaagatcctcccgccggaggatatgccgttcatggccgacggaact
cccgtcgacatcatcttgaacacccacggtgtcccgcgtcgtatgaacatcggccaggtc
ctggagatccacctcggttggctggcagcagccggctggtccgtggatccggaggatccg
aagaacgctgagctcatcaagaccctccccgaggagctttacgacgtccccgccgggtcg
ctcaccgcgacccccgtcttcgacggtgccaccaacgaagagctctccggcctgctggct
aactcccgcccgaaccgtgacggcgacgtcatggtcgacgagaccggcaagacgatgctc
ctcgacggtcgctctggcgagccgttcccgtaccccgtttcggtgggctacatgtacctc
ctcaagctccaccacctggtggacgagaagatccacgcccgctctaccggcccgtactcc
atgatcacccagcagccgctcggcggtaaggcccagttcggtggccagcgcttcggtgag
atggaggtgtgggcaatgcaggcatatggtgctgcctacacgctgcaggagcttctgacc
atcaagtccgatgacgtcgtcggccgtgtcaaggtctacgaggcaatcgttaagggcgag
aacatcccggacccgggtatccccgagtccttcaaggttctcctcaaggagctgcagtcc
ctgtgcctcaacgtggaggttctctccgccgacggcaccccgatggaactgtctggttct
gatgacgacgagctcgactccgctggatcctcgctgggcatcaacctgtcccacgacgag
cgctccgacgctgacgtcagctaa
DBGET
integrated database retrieval system
