Cryptococcus tetragattii: 91989092
Help
Entry
91989092 CDS
T10981
Symbol
I308_102234
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
91989092 (I308_102234)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cteg03019
]
91989092 (I308_102234)
Messenger RNA biogenesis [BR:
cteg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
91989092 (I308_102234)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
91989092 (I308_102234)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
ARM_Cnot1
CNOT1_HEAT
NOT1_connector
Acetyltransf_11
Motif
Other DBs
NCBI-GeneID:
91989092
NCBI-ProteinID:
XP_066615562
LinkDB
All DBs
Position
3:complement(1545956..1553104)
Genome browser
AA seq
2265 aa
AA seq
DB search
MSIPPPGLGGGVSRTGPPPGFGGGAAHSPVSDASATTMASSAGVAGSVGGGAVRRDGQGG
TAVIVRAQIVFLLTTFTEDSFEKASTEIRTLASTNGPEMYHHFLRRAVVVANPIIQTLIQ
HSNQYKDDPAAPPPQIPTTGQAALVWRLLVTEAARAARDVQLAPHFSFIMLSSSPSTPLP
LPSLRLFNLPPALLFSLSAYTLASPHVFPQNHASYPVFHAILAQTFQPTMELLRSPGVPF
WMMNIPGREPFTDDLTLQEARTLILALFPRAQGPASGTASRPATPTNPTSPHSSPLNSLQ
RATLLTSLTVKFSSPAIILQTLSALSPGGPPRSPGSIPLEDILFELGESLTQDEGTVEAV
VQRWWMSWLFEGSPEDVRRRVTEEACHAVHGLCEGLPLGRVVDLHGVIKGLSAVDAISWP
DVVKSFDTPMTIAAYPSSIPLLVSLICLPSQTPVPPMAGLLPAHLDAPIWENISSLLSVL
THLTSLAPDAMPIFTMPSAPPPSVYSRIVDPPPSEQVWSKAARQQARDLQGAGLWNTLGL
IQVLVHACALAEMDHHSDREREERADIGRRATEILEKAAKLAPELVLIALEKLPKPLPSP
VVVQQTRLLAIYLSTKPSDITSSALVFHQMWEINPENLLSVLLEFYGEDENNLGRIVEIG
SELKDNLHFVLDVAALASNRELLNLERWLADGIEVKGEEFLEAIFDFVEHKIRLEFEHQH
QPENAPPLLFALGPTVYSIFIRVVRNAPNLAREDIARFKNLRTDILILHPRLLNLRPHSK
QEQGFSEAKFSKDVVEKVDELYQRMYSGQLKLDDVVEELKAFQKSDDNKEQDIFAHALHS
LFDEYKFVKSYPPKELTMTGLLFGAIIDYRLVKDTPAFVATRYVLDACKTPPHEPLYQFG
ITALSVLRNSLVDFPGLCRSLLEIPALHESHPVLINDIQQALIEREELDLQGGVKLAFPA
LKLPVLIEEGDDEFREPETAKKDAIMFHVNQIAPTNYEDKAKALLELFEDQYSRWFAHYF
IDVRVSLEQNRHEIYLQLLQKLGSPLLDRHILWETYRKARELLNSEATINSASERAILKT
VAMWLGRITLAQNKPIRMKELSVKDILIQGYDTKRLIVAIPFVCNLLASCRDSAVFHPPN
PWLVAILRLLSEFYHFGELRLNMKFEIEVLFSKLGIELDSFEPSNLLRMHVPPPPAQPEI
PNRLDLELQRATTELVNGSQRLGDLPGNEAYARIQQLQTEQAVQAAQDALARRVDELIAQ
LPEYLVFNQDYPIFTAPTLKRIVHHSIDRAIREIITPVIERSVTIAGISSRDLIQKDFGT
EPDAIKMRQAAHMMVQNLAGSLALVTCKEPLRSSMIANVKSMLEQNGYTDETMPDAMIAG
VVNQNLDVACAVLKKAAMEKAAKDIDVNLAPQYAARKAHQSSRSTAPFWDGASFGVAISH
TALPDPLKLRPGGLTPQQFRVYEDFGEPTRMLSSHPAANGDYLSASYQNLTLNDGLVPAE
IKTGPSPRHGFVQDVAEAPEVVASPHAIPPQTSIDKFHEVAAEIQKIVSQTPVPSISALP
ADHELRDLIRAIVIIANQSVHRENTTLAIAQKVVQLLYRSTVQLGREVYVYLLQQLCDLS
AKVDKEVKQWLIYAEDVRKLNVPVTVTLLRAQSIGVQELDVALSHIVIRSYPSEILDFVT
ELIRECSVSDIAFLPRQAFSHSLASLLKAQEAGHATAQVDSLLEELRGPREPQSSIEGDR
SKTVIDSKLQERLAHYFLEWVRVCSSSKDPEVPFVPYITFLQKEGILSGEDVSSAFYRTA
INTAVDLDTAKLNPDGSSRFYGVDALAKLILLIVKNYGDKSGASSVGRAVYYYNKIITIM
SYSLVQRQLAMGDAFNQRPWARFFTSMLSELATIEYNLPETYIGCLKHLANNLGITQPTY
APRFAFGWVSIISHRLFMPKLLSTQRDEGWPEFHRCVMWLLRFLAPFLQSDDMTPSSRSI
FRATIRLLMLLLHDFPEFLVEFYHTLSTVIPPHCTQMRNIVLSAFPHSEAPLPDYYKRLD
QLVVEMQRFPTVRSDYIGALADGNVKAAIDQYVRTGVPTLPSIVAELKNRIAVKSLGPQG
STAVTWNHTLMHASVFYLGTTAVARTFQQTGVVSFDPKAPEVAVLAGLAHAFDGEGQYYM
LNVVADQLRYPSAHTLFFIHFMLFLFGTSVQPELSSTIPERIARILLERTIVKRPHPWGL
LVTFIELLDNEAYGFWKQPFVRAQDEVFRLFGQVRQSVAARRELQ
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatccctcctcccggcctgggaggcggggtcagcagaacaggaccgcctccggga
ttcggtggtggtgcggcccattccccagttagcgatgcgagtgcgaccactatggcaagc
agtgccggagttgcgggaagtgttggcggtggtgctgttagaagagacggtcaaggcggg
accgcggtgatcgtcagagcacagattgtattcttgttaacaacatttacggaagatagc
tttgaaaaggcctcaactgagatccgaacgcttgcgtctaccaatgggccggaaatgtac
caccactttttacggcgagcggtagtggttgccaacccaattatccagactttaatccaa
cattccaaccagtacaaggatgaccctgccgcgccgcctcctcagattcctaccacgggt
caagctgcgcttgtttggagattgctggttactgaagcagctagagcggctagggatgtg
cagctcgcgccccatttctcctttatcatgctttcctcctccccatcaactcctcttcct
ttgccctcgctacgattgtttaacctccctcctgcgcttcttttctctctctcagcatac
acactagcgtcaccccacgtttttccccaaaaccacgcgtcttatcccgttttccatgct
atcctcgcacaaactttccaacctacgatggagcttctacgatcgccaggtgttccattc
tggatgatgaacattcctggaagagagccctttaccgacgatttaactttgcaggaagcc
aggactttgatcctcgcactctttccgagggcccagggccctgctagtggcaccgcttct
cgacctgctacgcctaccaacccgacttcgccacattcttctcctctcaactctcttcaa
cgtgcgacccttctcacttctctcactgtcaagttttcgtctcccgctatcatccttcaa
actttatccgcgttgtctccaggtggaccgccccggtcgccaggcagcattccccttgaa
gacattttattcgagctgggtgagagccttacccaagacgaaggcaccgttgaggctgtt
gtgcagagatggtggatgtcttggttgtttgagggttcgccagaagatgtcaggcgaaga
gtcacggaagaagcgtgccatgcggtccatggtctgtgtgagggattgcccttgggacgt
gtcgtagacctgcatggcgtgatcaaaggattgtcggcggtcgatgctatctcctggccc
gacgtggtcaagtcatttgacactccgatgaccattgcggcatatccttcatctattccc
ctcctcgtttccctcatatgtcttccatcgcagacgcccgttccaccaatggctggtctg
ttgccagcacaccttgacgcgccgatttgggaaaacatttcttcacttctctctgtgttg
acgcaccttacgagccttgcgcccgatgcgatgcccatcttcactatgccatccgcccct
ccgccctcagtctactctcgtatcgtcgatcctccaccttccgagcaagtgtggagcaag
gctgctcgtcagcaggcgagggatttacagggtgctggattgtggaatactctgggttta
atccaagtactggtgcatgcgtgtgctttggcagagatggaccatcattccgacagagaa
agggaagagcgggcggatattggcaggagagctacagaaattttggagaaggcagccaaa
ttggcgccagagttggttttgattgctctagagaagcttccaaaacctcttccctcacct
gtggtcgttcaacagactcgtctgttggcgatttacttgtcaactaaacctagcgatatc
acttcatccgccttagtatttcatcagatgtgggaaataaaccctgaaaaccttttatcg
gtcttgttagagttctatggggaagacgagaacaatttgggaagaattgtggagatcggc
tcagaattgaaggataaccttcactttgtcctcgatgtggctgctttggcatccaacaga
gagttgctcaacttggagcgctggttggcggatgggattgaagttaagggagaagagttc
ctcgaggctatctttgactttgttgagcacaagatccgtctcgagtttgagcatcagcat
cagcctgaaaacgcgcctcctctgttgttcgccctcggtcccactgtctattctatcttc
atccgtgtggttcgcaatgcccccaacctcgctcgtgaggacattgctcgtttcaaaaac
cttcgtacggatatactcatccttcaccctcgtcttctcaatctccgaccccatagcaag
caggagcaaggcttctctgaagccaaattctccaaggacgttgttgaaaaggtggacgaa
ctctatcaacgaatgtacagtggacagctcaagttggatgacgtggttgaggagctcaaa
gctttccaaaagtctgatgacaacaaggaacaagatatctttgcgcacgcacttcactcg
ctctttgacgagtacaagtttgtcaagtcgtatcctcccaaggaattgactatgactggt
cttctcttcggtgccatcattgactatcgacttgtcaaggacaccccggcgtttgtggcg
acacgatacgtcttggatgcttgcaagactcctccccatgagcccttgtaccaatttggt
atcaccgctttgagtgtgctccgtaattcgcttgttgacttccccggtctctgtcgatct
ctcttagagattcctgctcttcatgagtctcatcctgttttaatcaatgacatccagcaa
gcattgatcgagagggaagagttggaccttcaaggcggtgtcaagttggctttccctgct
ctcaaattgccggtgcttattgaagagggagatgacgagtttagagagccagaaactgcg
aagaaagacgccatcatgttccacgtcaaccagatcgctcccaccaactacgaggataag
gctaaggctttgctcgaactattcgaagaccagtattcccgttggttcgcccactatttc
atcgacgtccgagtcagtcttgagcagaataggcatgagatctacttgcaattgcttcaa
aagctcggctcacctcttcttgatcgacacatcctctgggagacttacaggaaagcaagg
gagttgctcaactcggaggcaacaatcaactctgcttcagagcgtgcgattctcaaaaca
gtagcgatgtggttgggccgtatcactcttgcccagaacaagccaatcaggatgaaagaa
ctctccgtaaaggatatcttgatccaaggttacgacaccaaacgacttatcgtcgccatc
cccttcgtctgtaatttgctcgcctcttgcagagactcggctgtcttccacccgcccaac
ccttggttggtcgccatccttagacttctttctgagttttaccactttggtgagcttaga
ctcaatatgaagtttgagatcgaagttcttttcagcaagctcggtatcgaacttgactcc
ttcgagccatccaatctcctgcgcatgcatgttccaccaccccccgctcagcccgagatc
cccaaccgtctcgacctcgaacttcaacgtgccacaaccgaacttgtgaatggttctcaa
cgacttggagacttgccgggtaacgaggcgtatgctcgtatccagcaattgcaaactgag
caagctgtacaagccgctcaggatgcgttggcacgtcgcgtcgacgagcttattgctcaa
cttcccgaatacctcgtcttcaaccaagattaccccatctttaccgctccaaccctcaag
cgtattgtgcaccactcaatcgaccgagccattcgcgagatcattactcctgttattgag
cgttctgtcaccatcgccggcatctcttctcgcgatttgattcaaaaagactttggcacc
gagcctgatgccattaaaatgcgccaagctgctcacatgatggtgcagaaccttgccggt
agcttggccctggtgacgtgcaaagagccattgcgttctagcatgattgccaatgtcaag
tctatgctcgaacagaatggctacacggatgagaccatgccggatgcgatgattgcaggt
gtagtaaatcagaacttggacgtagcgtgtgcggtgttgaagaaagcggccatggagaaa
gcagccaaggatattgatgtcaatcttgcacctcaatatgctgcgcgaaaggcccaccag
agttcgaggtctactgctcctttctgggacggtgcttctttcggtgttgccatctctcac
actgcccttcccgaccctctcaagcttcgtcctggtggtcttaccccgcagcagttcagg
gtctatgaagactttggcgagcctacaaggatgctgtcctctcaccctgctgccaacggc
gattatctatccgccagctatcaaaaccttactctcaacgacgggctcgttcctgcggaa
atcaagactggtccttcgcctcgtcacggctttgttcaagatgttgccgaggctcccgaa
gttgttgcatcgccccatgctatcccacctcagactagcattgacaaattccacgaagtt
gcggctgagatacagaagatcgtctctcagacccctgtacctagcatttcggcccttccg
gccgaccatgagctccgagatcttattcgagccatcgtcattatagcgaaccagtctgtg
cacagggagaacacgactttggcgattgcccaaaaagttgtgcagctattgtacaggtcc
acggtacaattgggtagggaagtatatgtgtacttgttgcagcagctgtgcgatttgtcg
gcgaaggtggacaaggaagtgaagcagtggttgatctatgcggaggatgtgaggaagctg
aatgtccctgttactgtaactctccttcgcgctcagtccattggcgtgcaagagcttgat
gtcgcactttcccacatcgtcatccgatcctatccttccgaaatcctcgacttcgtcact
gaactcattcgtgaatgctcggtgtcagatattgcattccttcctcggcaggccttctct
catagtctggcttcgctcctcaaggctcaggaagctggtcatgctaccgctcaagttgac
tcattactcgaggagcttcgtggcccacgagagcctcagagtagcatcgagggtgaccgg
tccaagactgtcattgacagcaagcttcaggagaggttggcacactacttcttggagtgg
gtccgggtctgcagctctagcaaggatcctgaagttccatttgtgccctacattactttc
ttgcaaaaggagggtatcctcagcggtgaggatgtctcatctgcattttaccgtactgct
atcaatactgccgtcgatctcgacactgctaagcttaaccccgatggctcgtcaaggttc
tacggcgtggatgctttggccaaactcattctactcatcgttaaaaactacggtgacaag
agcggagccagcagtgttggcagggctgtctactattacaacaagatcattacgatcatg
tcgtactccctcgtgcaaaggcaacttgccatgggtgatgctttcaaccagcgaccttgg
gccagattctttacaagtatgttgagcgagttggccactattgagtataaccttcctgag
acatatatcggctgcttgaagcacctcgccaacaatctcggcattactcagcccacctac
gcccctcgcttcgcgttcggttgggtctcaatcatttcccaccgtcttttcatgccaaaa
ctcctctccacccaaagggacgaagggtggcccgagttccaccgatgtgtcatgtggctc
cttcgcttccttgcgcctttccttcaatcagatgacatgactccctcgtcaaggtcaatc
ttcagagccactattcgacttctcatgcttcttttgcatgacttccccgagttcctcgtt
gagttctaccatactctctcgaccgtcattcctccccactgcactcaaatgcgaaacatc
gtcctttctgctttccctcattccgaggctcctcttcccgattactacaagcggcttgat
cagcttgttgtggagatgcaacgattccccaccgttcgctcagactacattggcgcgttg
gccgacggcaacgtcaaggccgccatcgaccagtatgtccgaactggcgtccccactctt
ccttcaattgtggcggagctcaagaacaggatcgcggtcaagtctttaggtcctcaaggc
agcactgctgtcacatggaaccacacattaatgcacgcgtcagtcttctatcttggtacc
actgcggttgccaggaccttccagcaaacgggtgttgtgagctttgatccgaaggctcct
gaggtggccgtgttggctggtttggcacatgcgtttgacggcgaaggccaatactatatg
ctcaacgtggttgctgatcagcttcgatacccatccgctcatacccttttcttcatccac
ttcatgctcttccttttcggtaccagcgtgcaacccgagctttcatctaccattcccgag
cgtatcgctcgtatccttctcgaacgaaccatcgtcaaacgccctcatccttggggtcta
cttgtcactttcatcgagttgctcgacaatgaggcttatgggttctggaaacagccgttt
gtcagggcgcaggatgaggtgtttaggctcttcggccaggtgcgacagtctgtcgcggcg
cgtagggaattgcagtag
DBGET
integrated database retrieval system
