KEGG   Yamadazyma tenuis: 18250104
Entry
18250104          CDS       T03099                                 
Symbol
RRP45, PSN45_002849
Name
(RefSeq) 3'-5'-exoribonuclease
  KO
K03678  exosome complex component RRP45
Organism
cten  Yamadazyma tenuis
Pathway
cten03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cten00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    18250104 (RRP45)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cten03019]
    18250104 (RRP45)
Messenger RNA biogenesis [BR:cten03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     18250104 (RRP45)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C DUF3479 OB_RRP5
Other DBs
NCBI-GeneID: 18250104
NCBI-ProteinID: XP_006683803
UniProt: G3AWH9
LinkDB
Position
3:966119..967024
AA seq 301 aa
MKSNDISINETKYIIESLKQGTRLDGRKLDEIRKPEVVLGDNGYVELGWGQTKVVIKTSS
EIVKPFEDRPNEGLLVINNELSPMASIKFDERSVDEVMINRIIEKSIRKSNALDLEGLCI
KTGEKVWLIRVDLSIINFDGNLIDSCCFGSIISLIHFKLPNYSLDTNGNIKVYNLDEKPP
ISLSVLHIPITLSISFFNPLNDEENLKSNNNYEISVFDATMKEELVRDSYLVVSVNSNKE
LIQLTKLGGIPIDSVELVNLCQRCYAYAEELTELIKTTVKRKEEEEFKRLNLRLLKSVDT
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaagtcgaacgatatctccatcaacgaaaccaaatatatcatagagtctttaaagcaa
ggaacaaggctagatgggcgaaagttggatgagatacgtaaacctgaggtggtacttggt
gacaatggatacgttgagcttgggtggggtcaaacgaaggtggtgatcaaaacatcgagt
gaaattgtaaagcctttcgaagacaggccgaatgaaggacttttggtgattaataacgag
ttgtccccaatggcatcaataaagttcgacgaaagaagtgtggatgaggtaatgatcaac
cgtataattgaaaagtcaatcagaaaatcaaatgcactcgacttggaaggattgtgcatc
aagacaggagaaaaagtatggcttatcagagtggacctaagtatcatcaacttcgatgga
aacttgatcgactcttgctgttttggaagtattataagtttgatccacttcaagttaccc
aactactcgttggataccaacggtaatatcaaggtgtataatttggatgagaaaccaccc
attagtttgagtgttttgcatattcctatcacgctaagcattctgtttttcaaccctttg
aacgatgaagaaaacttgaagagtaacaacaactatgagatatcggttttcgatgctacc
atgaaagaagagcttgtgagagacagttatttggttgtatctgtaaacagcaataaggag
ttgattcagttgaccaaattaggaggaattcccattgattcagtcgagttggtaaacttg
tgccaaaggtgctatgcgtacgcggaggagttgactgagttaattaaaacgacagtgaag
aggaaggaagaagaagagttcaagagattgaatttgagacttcttaagagtgttgatacc
cgataa

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