Yamadazyma tenuis: 18250199
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Entry
18250199 CDS
T03099
Symbol
SKI3, PSN45_002602
Name
(RefSeq) Superkiller protein 3
KO
K12600
superkiller protein 3
Organism
cten
Yamadazyma tenuis
Pathway
cten03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18250199 (SKI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cten03019
]
18250199 (SKI3)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
18250199 (SKI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_14
TPR_22
TPR_12
TPR_19
TPR_8
TPR_1
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_7
TPR_6
ANAPC3
TPR_9
ANAPC8
ARM_TT21_C
ARM_TT21_5th
TPR_10
PG_binding_1
Motif
Other DBs
NCBI-GeneID:
18250199
NCBI-ProteinID:
XP_006684938
UniProt:
G3AZW0
LinkDB
All DBs
Position
3:complement(461769..465953)
Genome browser
AA seq
1394 aa
AA seq
DB search
MSTAKHYLKLAKGAIDKNDPELALEYVQDVLEADKNNFFAFLFQGKSYQLINDTDQAIKA
FQKATQLQPDNLLGWKGYFQVVSESGVHELFFQVLAQYLQVEAEQGQGLGQTLRNASNYI
KKHNLKGKPDLHELFLSHVIPGTKLHELAPSYFGRDEDNLQKLVDLVFKKENELVVKACF
KERMKFPKQLSYDQQDLMNNIIWPIYKNSKLSDYFDEFLNICNDDDKRKKYQELYFQYKY
DVLKVSPKKSKSKILQQVKDMCDDLILLNIPSHFVWSKYFDLLDVKDFRDLDKDQVIFCI
KNFQAEGLGILFYGLVHSEISPFNRDEISKEVKIETETEVEEDEDQDLINLMETKDDGPS
RFSAEQILELIKEGSSKLDSVFSKRILIDYYLHMREYLGASDICRVGIKLLADMQHAIGV
DLVNSRASVVCSLAVVYTYHEAPKNYSRALELYERILELDKHNKRARIGKGLILLEKGNL
SVAKKLLTQAFNDFPDDSDVLMELGWCEVQLGNHQVGRTHLEKSLKSLTGLDIQSCELRA
SINWRIARSYILEKPDNVDVPYQLLIKSLKEYNSFAPSYTALGIIYFEVYGDKVRAQKCF
YKAFELDIAEVESAKYLVTDMTSKKEWEVAEILCSKIVDTERARKALSSQQDKSWPYRVL
GCSALNKQDDAKAIQWFQTALRMASMDFECWVGLGEAYYNCGRFDAAQKVFERALTLKEE
ESWQITYMLGKVLCDTKEFDDGIEKLERALELRPGEECVVNALFQAKIEQIQKLLPNGYF
GRVLDINRNVLELVKQCSKINKKTQSLWLGLYHCLSVYLKIQSNLEDFPLAEVEDIFNEF
KDETFTEPFLQELNQIDDNINLQGCSDIFRNGKHVEGITSLIIFNFKVCIHLLPEQGRYM
RSINYYNLGLAYYEAFNHCEKENLRTAAIKCFKKAVVLEGKNSSFWIALGNAYSSFSPQI
SQHCFIKATALESRDGDIWNNLAALYLKYGDVELAQQAFLRSQSVAPEQSQAWLGHALAS
KASADVEKAHSLFNHAYILSNGRSPLAQLLYALSIISKRVGNNSSPEDIETAQDFSIANF
AIQNYLKFYPKDKMGLKVALTISERCKTFDLSKDIGQRLLVILEAEYEETESPQILQEFV
NTKVQVARIHLALGDYAQAVQESEMVLGLIDETDALDINKRNLLSARITIGLAHFFDKDL
EKSVEQLKAILVEYSQYEWLVTLTAQMLNAFNSPDTKQAALDQLFSFIEDSDTESSLIIV
LTLGAIALKDGLEDILPAVKDELHGLSLTQIVGDTHKYVPKIIQEISSRLGQSHESKIWE
RTAILFPQDFNVWKNINSQLALQIANLQETKLTSLDMSDALVAYGRFRDVQRSIVLAPHN
ANAWASFYSVSSPK
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggcaaaacattatttgaagctcgccaagggtgcaattgacaaaaatgaccca
gagcttgcattggagtatgttcaagatgtgttggaagccgacaagaacaacttttttgcc
ttccttttccaaggtaaatcgtaccaactcataaacgacacagatcaagccataaaggct
tttcagaaagccacccaattacaaccagataacttgcttgggtggaaaggatattttcaa
gtggttagtgagctgggcgtccatgaactttttttccaggttttggcgcagtatttacaa
gttgaagctgagcagggccagggtttaggccaaacgttaagaaatgcgtcaaattacatt
aaaaagcacaatctcaaaggaaagccagacctccatgagttgtttttatcgcacgtgatt
ccaggtaccaagcttcatgagcttgctccttcgtacttcggaagagatgaagataattta
cagaagttggtagacttggtgtttaagaaggaaaatgaattggtggtgaaggcttgcttc
aaagaaagaatgaagttcccgaaacagctcagctatgaccagcaagaccttatgaataac
ataatatggcccatttacaaaaactccaaattgtcagattactttgacgagtttttaaac
atttgcaatgatgacgacaaaagaaagaaataccaagaactctatttccaatacaaatat
gacgttttgaaagtgtccccaaagaagtccaagtccaaaatattacaacaagtaaaagat
atgtgtgacgacttgattcttttaaacatccccagtcattttgtatggagtaaatacttt
gatttgctcgacgtcaaggatttccgtgatttagataaagaccaggtgatcttctgtata
aagaacttccaagctgagggccttgggatccttttttatgggcttgtccacagcgagatt
tctccgttcaacagagacgaaatctcgaaggaagtgaaaattgaaacagaaacagaggta
gaggaagacgaggatcaagacctcataaatctcatggaaactaaagatgacgggccatcc
cgcttctcggcagaacagattttagagctcataaaggagggttcttccaagttagactcg
gtattttccaagcgaatcttgatagactattacctccatatgagagagtatttgggagct
tctgacatttgccgtgttggtataaaacttcttgcagacatgcagcatgcaattggagtt
gacttggtcaactctagagcgtccgtcgtttgttctctagccgtggtatatacttatcat
gaagcacccaaaaactatagcagagcattggaactctatgaaagaatcttggaactcgac
aagcataacaaaagagcaagaattgggaaggggttaattctcttggagaagggaaacctt
tctgttgcaaagaagttattaacgcaagcattcaacgactttccagacgattcggatgta
ttgatggagctaggatggtgtgaggttcagctaggaaatcaccaggttggaagaacgcat
ttggagaagtcgctcaagtcattgactggattggatatccaaagctgtgaattgagagcc
tctattaactggagaatcgcccgaagttatatactcgagaaacccgacaatgtggatgtt
ccctatcagcttttgatcaagtctttgaaggagtataacagctttgctccttcctacacg
gctcttggtatcatatactttgaggtgtatggggataaagtgagggcccaaaagtgtttt
tacaaggcgttcgagttggatatcgctgaagtggaatctgccaaatacttggtcactgac
atgaccagcaagaaagagtgggaagttgctgaaatcttatgttccaaaattgttgataca
gaaagagctcgtaaagccttgagttcccagcaagacaagtcatggccctatcgagtctta
gggtgttctgctttgaacaaacaagacgatgccaaagccatccaatggtttcaaactgct
ttgcgaatggcatctatggatttcgaatgttgggtgggtctaggtgaagcttactacaat
tgcggaagatttgatgctgctcaaaaggtgtttgaacgagccttgactctcaaggaagag
gaatcttggcaaattacatatatgttgggaaaagtcttgtgtgacaccaaagagtttgat
gacggaatcgagaagttggaaagagctcttgaattgagaccaggtgaagaatgtgttgta
aatgcattgttccaggccaagattgagcaaatccaaaagcttttacccaatgggtatttt
ggaagggtgttggatatcaaccgaaacgtcttggagttggtcaagcagtgcagcaagatt
aacaagaagacacagtcgttgtggttgggattatatcactgtcttctggtgtatctaaag
atccagtccaacttggaggactttcctctagcagaagtggaagatatcttcaacgagttc
aaggacgagactttcacagaaccatttttacaagaattgaatcagatcgatgacaatatt
aaccttcaaggctgtagtgatatcttcagaaacggaaagcatgtcgagggtattacatcc
ttgattatcttcaactttaaagtttgcattcacttactacccgaacaaggtagatacatg
agatccatcaactactacaatttaggtttggcatattacgaagcattcaatcattgtgaa
aaggaaaaccttcgtactgcagctatcaagtgtttcaagaaagcggttgtcctagaaggc
aaaaactcaagtttctggattgctttgggaaatgcctactcttcattcagcccacagatc
agtcagcattgtttcattaaggccacggctttggaatcaagagatggggacatttggaac
aaccttgctgcactttacttgaaatacggagacgtggaattggcccagcaagcattttta
agatcccagtcggtggctccagaacaatcccaagcatggttaggacatgcattggcgtcg
aaagcatcagcagatgtggaaaaggctcatagcttgttcaaccatgcgtatatcttgtcc
aacggccggtcgcctttagcccagcttttgtacgccttatcgatcatcagcaagcgggta
ggcaacaactcaagtcctgaagatatagaaacagcacaggactttagtattgccaacttt
gccattcaaaactatctcaagttctaccccaaggacaaaatggggttgaaggtagccttg
acaatcagtgaacgttgtaagacctttgatttgagcaaagacattggccaacggttgtta
gtgatcttggaagctgaatacgaggaaaccgagagtccccaaattcttcaagaattcgtc
aacaccaaggtccaagtggccagaatccatttggcactcggcgactacgctcaagcagta
caagaaagtgaaatggtattgggtctcatcgatgaaactgatgccctagatatcaacaag
cgcaacctcttgtctgctcgtataaccatcggattagcccattttttcgacaaggacttg
gaaaagtctgtggagcagttgaaggcgattttggtggagtacagccagtatgaatggctt
gttaccttgacggctcagatgttgaatgcttttaatagtcctgacaccaaacaagcggct
ttagaccaattgttctcgttcattgaagacagcgacaccgagtcttcgttaatcatagtg
ctcactctaggcgccatcgccttgaaagacggactcgaggacattttaccagcagtcaaa
gacgagctccatggactctcattaacacaaatagtgggagatacccacaaatacgtaccc
aagatcatacaagagatcagcctgcgactcggccaatcccacgagtccaagatctgggaa
cggacggccattttgtttccccaggactttaatgtgtggaagaacatcaatagccaattg
gcgctccagattgccaacttacaagagacaaaactcacttccttagacatgagcgacgct
cttgttgcatacggacggttccgagacgtccaaagaagcattgtgctagctccacacaac
gccaatgcgtgggccagtttctatctggttagttctcctaagtag
DBGET
integrated database retrieval system
