Corynebacterium terpenotabidum: A606_09920
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Entry
A606_09920 CDS
T02714
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cter
Corynebacterium terpenotabidum
Pathway
cter03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cter00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A606_09920 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cter03021
]
A606_09920 (rpoB)
03400 DNA repair and recombination proteins [BR:
cter03400
]
A606_09920 (rpoB)
Enzymes [BR:
cter01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A606_09920 (rpoB)
Transcription machinery [BR:
cter03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A606_09920 (rpoB)
DNA repair and recombination proteins [BR:
cter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A606_09920 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AGP31623
UniProt:
S4XLX8
LinkDB
All DBs
Position
complement(2269548..2273039)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAVSRQTSSTAGIPGASHRYSFAKIHAPIEVPGLLDVQRESFAWLVGTPEWRARRQAQAE
EGDRVTSGLEDILDELSPVEDYSENMSLTLSEPRFDDVKNTIDECKDKDINYSAPLYVTA
EFTNALSGEIKSQTVFIGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDESIDPSTER
PLHAVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGLTTEEITQRFGFSEI
MMTTLEKDGVANTDEALLEIYRKQRPGESPTRDSAQALLENSFFKAKRYDLAKVGRYKVN
RKLGLDGDSGAMTLTEQDILTTIEYLVRLHAGEKSMTSPDGQDIPLGVDDIDHFGNRRLR
TVGELIQNQIRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQF
MDQNNSLSGLTHKRRLSALGPGGLSRERAGLEVRDVHASHYGRMCPIETPEGPNIGLIGN
LATYARVNPFGFIETPYRRVSEGVITDQVDYLTADEEDRHIIAQAKTLVDADGRFVDAEI
EVRLRGGDVEVVPATQVDYMDVSPRQMVSVGTAMIPFLEHDDANRALMGANMQKQAVPLL
RSEAPYVGTGMELRSAYDAGDVIVTPKAGAVEYVSADYITIMDDDGVRDTYMLRKFERTN
QGTCYNQKPLVEQGQRVEAGQAIADGPGTHHGEMSLGRNLLVAFMPWEGHNYEDAIILNQ
RMVEDDLLTSIHIEEHEIDARDTKLGPEEITRDIPNVGDDVLADLDDRGIVRIGADVRDG
DILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRVFSREDDD
DLAPGVNQMVRVYVAQKRKIQDGDKMAGRHGNKGVVGKILPAEDMPFLPDGTPVDIILNT
HGVPRRMNIGQVLETHLGWLAKNGWKVDPESPDPKIQEMLKTLPEDLYDVPPESLVSTPV
FDGAENAELSGLLRSVRPNADGLPLTDEFGKAVLIDGRSGEPYPYPISVGYMYMLKLHHL
VDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDV
VGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLAADGTPMELNSTDDDELD
HANAALGINLSRDERPDAETDVI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgccagaccagttccacggccggaatccccggggcttcgcatcgttac
tccttcgcgaagatccatgccccgatcgaggtgcccggtcttctcgacgttcagagagag
tccttcgcctggctcgtcggcacgcctgaatggcgcgcccggcgacaggcgcaggctgag
gagggcgaccgcgtcaccagcggtctcgaggacatcctcgatgaactgtcccccgtcgag
gactactccgagaacatgtccctgaccctgtccgagccgcgcttcgacgacgtgaagaac
acgatcgacgagtgcaaggacaaggacatcaactactcggcgccgctctacgtgacggcc
gagttcaccaatgcgctttccggtgagatcaagagccagaccgtcttcatcggtgacttc
ccgatgatgaccgacaagggcaccttcatcatcaacggcaccgagcgtgtcgtcgtgtcc
cagctggtccgctccccgggcgtctacttcgacgagtccattgacccgtccaccgagcgt
ccgctgcacgccgtgaaggtcatcccttcccgcggcgcgtggctggagttcgacgtcgac
aagcgggacaccgtcggtgtccgcatcgaccgcaagcgccgccagccggtcaccgtgctg
ctcaaggccctgggtctcaccaccgaggagatcacgcagcggttcggtttctccgagatc
atgatgaccaccctcgagaaggacggcgtcgccaacaccgacgaagccctcctcgagatc
taccgcaagcagcgtcccggcgagtcgccgacccgtgactccgcccaggccctgctggag
aacagcttcttcaaggccaagcgctacgacctggccaaggtcggccgctacaaggtcaac
cgcaagctcggtcttgacggtgattccggtgcgatgacgctcaccgagcaggacatcctc
accaccatcgagtacctcgtgcgcctgcacgccggtgagaagtccatgacctcccccgac
ggtcaggatatcccgctcggcgtcgacgacatcgaccacttcggcaaccgtcgtctccgc
acggtcggtgagctgatccagaaccagattcgggtcggtctgtcccgcatggagcgtgtc
gtccgcgagcggatgaccacgcaggatgccgagtccatcaccccgacctcgctgatcaac
gtgcgcccggtctccgcggccatccgcgagttcttcggcacctcccagctgtcccagttc
atggaccagaacaactcgctgtcgggtctgacccacaagcgtcgtctgtccgctctgggc
ccgggcggcctgtcgcgtgagcgcgccggccttgaggtccgtgacgtccacgcgtcccac
tacgggcgtatgtgcccgatcgagacccctgagggtccgaacatcggcctgatcggtaac
ctcgccacctacgcgcgggtcaaccccttcggtttcatcgagaccccctaccgtcgggtc
tccgagggcgtcatcaccgaccaggtggactacctcaccgccgatgaagaggaccgccac
atcatcgcccaggcgaagaccctggtcgacgccgacggtcgtttcgtcgacgccgagatc
gaggtccgcctccgcggcggcgatgtcgaggtcgtcccggcgacccaggtcgactacatg
gacgtctccccgcggcagatggtctccgtgggtaccgccatgatcccgttcctcgagcac
gacgacgccaaccgtgccctcatgggtgcgaacatgcagaagcaggctgtcccgctgctg
cgttccgaggcgccctacgtcggtaccggtatggagctgcgctcggcctacgatgccggt
gacgtcatcgtcaccccgaaggccggcgccgtggagtacgtctccgccgactacatcacc
atcatggacgacgacggtgtccgtgacacctacatgctgcgcaagttcgagcgcaccaac
cagggcacctgctacaaccagaagcccctggtcgagcagggtcagcgcgtcgaggccggc
caggccatcgccgacggccccggcacccaccacggtgagatgtcgctcggccgcaacctc
ctcgtcgccttcatgccgtgggagggccacaactacgaggacgccatcatcctcaaccag
cggatggtggaggacgacctcctcacctcgatccacatcgaggagcacgagatcgacgcc
cgggacaccaagctcggcccggaggagatcacccgcgacatccccaacgtcggtgacgac
gtgctcgccgacctcgacgaccgcggcattgtccgcatcggcgccgacgtccgcgacggc
gacatcctcgtcggcaaggtcaccccgaagggcgagaccgagctgaccccggaggagcgc
ctgctgcgcgccatcttcggtgagaaggcccgcgaagtccgcgacacctccatgaaggtg
ccccacggtgagaccggcaaggtcatcggcgtccgcgtcttctcgcgtgaggacgacgac
gacctggcccccggcgtcaaccagatggtccgcgtctacgtcgcccagaagcgcaagatc
caggacggcgacaagatggccggccgccacggtaacaagggcgtcgtcggcaagatcctg
ccggccgaggacatgccgttcctgccggacggtaccccggtcgacatcatcctcaacacc
cacggcgtgccgcgtcgtatgaacatcggccaggtcctcgagacccacctcggctggctg
gccaagaacggctggaaggtcgacccggagtccccggatccgaagatccaggagatgctg
aagaccctccccgaggatctctacgacgtcccgccggagtccctcgtctccaccccggtc
ttcgacggtgccgagaatgcggaactgtccggtctgctgcgctcggtgcgtccgaacgcc
gacggcctgccgctgaccgacgagttcggtaaggccgtgctcatcgacggtcgctcgggc
gagccgtacccgtacccgatctccgtcggctacatgtacatgctcaagctgcaccacctg
gtcgacgagaagatccacgcccggtccaccggtccgtactccatgatcacccagcagccg
ctcggcggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggccatg
caggcctacggtgcggcgtacacgctgcaggagctcctgaccatcaagtccgatgacgtc
gtcggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatcccggatccgggt
atccccgagtccttcaaggttctcctcaaggagctgcagtcgctgtgcctcaacgtcgag
gtcctcgccgctgacggcaccccgatggaactcaattccaccgatgacgacgaactcgac
cacgccaacgccgccctgggcatcaacctgtcccgtgacgagcgtcccgatgcagagacc
gacgtcatctaa
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