Comamonas testosteroni TK102: O987_00015
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Entry
O987_00015 CDS
T03218
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ctes
Comamonas testosteroni TK102
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctes03032
]
O987_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_00015 (gyrB)
Enzymes [BR:
ctes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
O987_00015 (gyrB)
DNA replication proteins [BR:
ctes03032
]
Prokaryotic type
DNA Topoisomerases
O987_00015 (gyrB)
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O987_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AIJ44207
UniProt:
A0A076PLD8
LinkDB
All DBs
Position
2860..5427
Genome browser
AA seq
855 aa
AA seq
DB search
MTEENKPDTQSAADAGGYGEGAIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNS
IDEALAGYCDDILVTIHADGSLSVIDNGRGIPTRVKMDDKHEPKRSAAEIALTELHAGGK
FNQNSYKVSGGLHGVGVSCVNALSIWLKLTVSRDGVRHEIDFSRGFVQNRLIEVVDGTEV
SPMRVLGPSDKRGTKVHFLPDQEIFKENFEFRYEILAKRLRELSFLNNGVRIRLKDERDG
KEDDFSGAGGVKGFVEFINGTKKVLHPTTFYAEGTRPAETYGGIPGTEIGVEVAMQWNDS
YAEQVLCFTNNIPQRDGGTHLTGLRAAMTRVIGKYIADNELAKKAKVEVTGDDMREGLCC
VLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVGKLLAEFLEEKPNDAKILCNKIVEAARA
REAARKAREMTRRKGVLDGMGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQ
AILPLRGKILNVEKARYEKLLSSQEIITLITALGTGIGKVSEDSGKSSSDDYNPDKLRYH
RIIIMTDADVDGAHIRTLLLTFFYRQMPDLVERGHIYIAQPPLYKVKNGKEELYLKDGPA
LNKYLLKIALNHASVNTGGDNPRTVEGEELAKLANMHLAAETVIERLSNFMDAEALRAIA
DGVQIKLDTIEQAQECAPILEAKLRELTTTGVPADVTAEIDPNSEHPILRISRHHHGNIK
SSILTQEFVRSHDYAALSDEAQNFVGLLGEGAKVTRGEGEKAKTEKVGDFRQAMAWLISE
AERTTGRQRYKGLGEMNPEQLWETTMDPNVRSLLQVKIGDAIEADRVFTMLMGDEVEPRR
NFIEDNALRAGNIDV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagagaacaagccagacacccagagcgccgcagatgcaggcggctatggcgaa
ggcgcaatccagatcctggaaggcctggaagccgtgcgcaagcgcccgggcatgtacatc
ggtgacacctcggacggcaccggtctgcaccacctggtcttcgaggtcgtggacaactcc
atcgacgaagcgctggccggctactgcgacgacattctggtcaccatccacgccgatggc
tcgctgtccgtgatcgacaacggccgcggcattcccacgcgcgtgaagatggacgacaag
cacgagcccaagcgctcggctgccgaaatcgccctgaccgagctgcacgctggcggcaag
ttcaaccagaacagctacaaggtctcgggcggcctgcacggcgtgggcgtgtcctgcgtg
aacgcgctgtccatctggctcaagctcaccgtcagccgcgacggcgtgcgccatgaaatc
gacttctcgcgcggctttgtgcaaaaccgcctgatcgaagtcgtggacggcaccgaagtc
tcgcccatgcgcgtgctcggccccagcgacaagcgcggcaccaaggtgcattttctgccc
gaccaggaaatcttcaaggagaacttcgagttccgctacgagattctggccaagcgcctg
cgcgagctgtccttcctgaacaacggcgtgcgcatccgcctgaaggacgagcgcgacggc
aaggaagacgacttctcgggcgccggcggcgtcaagggctttgtggaattcatcaacggc
accaagaaagtcctgcaccccaccaccttctacgccgaaggcacacgcccggcagagacc
tatggtggcattcccggcaccgaaatcggcgtcgaagtcgccatgcagtggaacgacagc
tatgccgagcaggtgctgtgcttcaccaacaacattccccagcgtgacggcggcacccac
ctgaccggcctgcgcgccgccatgacccgcgtcatcggcaagtacatcgccgacaacgaa
ctggccaagaaggccaaggtcgaagtcaccggcgacgacatgcgcgaaggcctgtgctgc
gtgctcagcgtgaaggtgcccgagcccaaattctccagccagaccaaggacaagctggtc
agctccgaagtccgtgcgcccgtggaagacattgtcggcaagctgctcgccgaattcctc
gaagaaaagcccaacgacgccaagattctctgcaacaagattgtcgaagccgcccgcgcc
cgcgaagccgcgcgcaaggcccgcgaaatgacgcgccgcaagggcgtgctcgacggcatg
ggcctgcccggcaagctggccgactgccaggaaaaagatcctgcgctgtgcgaaatctac
atcgtcgagggtgactccgccggcggctccgccaagcagggtcgcgatcgcaagttccag
gccatcctgccgctgcgcggcaagatcctgaacgtggaaaaggcccgctacgaaaagctg
ctgtccagccaggaaatcatcaccctgatcaccgccctgggcaccggcatcggcaaggtc
agcgaagactcgggcaagagcagcagcgacgactacaaccccgacaagctgcgctaccac
cgcatcatcatcatgaccgacgcggacgtggacggcgcccacatccgtaccctgctgctg
accttcttctaccgccagatgcccgacctggtcgagcgcggccatatctacatcgcccag
ccgccgctgtacaaggtcaagaacggcaaggaagagctctacctcaaggacggcccggcc
ctcaacaaatacctgctcaagatcgcgctgaaccatgccagcgtgaacaccggcggcgac
aatccgcgcaccgtggaaggcgaggagctggccaagctggccaacatgcacctggccgcc
gaaaccgtcatcgagcgcctgtccaacttcatggatgccgaagccctgcgcgccattgcc
gatggcgtgcagatcaagctcgacaccatcgagcaagcccaggagtgcgccccgattctc
gaagccaagctgcgcgagctgaccaccaccggcgtgccggccgatgtgacggccgagatc
gaccccaacagcgagcaccccatcctgcgcatcagccgccatcaccacggcaacatcaag
agctccatcctgacccaggagttcgtgcgcagccatgactacgccgccctgtccgacgaa
gcgcagaacttcgtcggcctgctgggcgaaggcgccaaggtcacgcgcggcgaaggcgaa
aaggccaagaccgagaaggtcggcgacttccgtcaggccatggcctggctgatctccgaa
gccgagcgcaccacgggccgccagcgctacaagggtctgggcgaaatgaaccccgagcag
ctctgggaaaccaccatggaccccaatgtccgcagcctgctgcaggtcaagatcggcgac
gccatcgaggccgaccgcgtcttcaccatgctcatgggcgacgaggtcgagccgcgccgc
aacttcatcgaagacaacgcgctgcgggcggggaatatcgacgtttga
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