Comamonas terrigena: CT3_38420
Help
Entry
CT3_38420 CDS
T09012
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ctez
Comamonas terrigena
Pathway
ctez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CT3_38420 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctez03021
]
CT3_38420 (rpoA)
03400 DNA repair and recombination proteins [BR:
ctez03400
]
CT3_38420 (rpoA)
Enzymes [BR:
ctez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CT3_38420 (rpoA)
Transcription machinery [BR:
ctez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CT3_38420 (rpoA)
DNA repair and recombination proteins [BR:
ctez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CT3_38420 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BBL26387
LinkDB
All DBs
Position
complement(4305317..4306315)
Genome browser
AA seq
332 aa
AA seq
DB search
MQTNLLKPKTINVEQLGHNRAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVSILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAGDIQTPHDVEI
INPDHVIATLSQGGKLDMQIKVEKGRGYVPGNVRRYGDESTKSIGRIVLDASFSPVRRVS
YNVESARVEQRTDLDKLVVEIETNGAINAEDAVRASAKILVEQLAVFAQLEGEFGEGGIL
QAGGNQRANATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGR
KSLNEIKEVLASRGLTLGMKLENWPPAGLEKR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaatctgctgaaacccaagacgatcaatgtagagcagctgggccacaaccgt
gccaaagtgaccctggagcctttcgagcgcggctacggccatacgctgggcaacgccctg
cgtcgcgtgttgctgtcgtccatggtgggttatgcagcgacggaagtcacgattgctggc
gtgttgcacgagtactcgtccatcgacggtgtgcaagaagatgtggtgagcatcctcctg
aacctcaagggcgtggtgttcaagctgcacaaccgtgatgaagtcaccctgagcctgcgc
aaagacggcgaaggtgtggtcaccgctggtgacatccagactccgcacgatgtggaaatc
atcaaccctgatcacgtcatcgccaccctgtcgcaaggcggcaagctggatatgcagatc
aaggtggaaaagggccgtggctatgtgcccggtaacgtgcgccgctatggtgacgagtcg
accaagtcgatcggccgtatcgtgctggacgcatcgttctcgcccgtgcgccgcgtgagc
tacaacgtggaatccgctcgcgtggaacagcgtaccgatctggacaagctggtcgttgaa
atcgaaaccaacggcgccatcaatgccgaagacgccgtgcgcgcatccgccaagatcctg
gtggaacaactggctgtgtttgcacagctggaaggcgagttcggtgaaggcggcatcctg
caagccggcggcaaccaacgtgccaacgcaacgttcgatccgatcctgctgcgccctgtg
gatgagctggaactgaccgttcgctcggccaactgcctgaaggcagaaaacatctactac
atcggtgatctgattcagcgcaccgaaaacgagctgctcaagacgcctaacctgggtcgc
aagtcgctcaacgaaatcaaggaagtcctcgcttcgcgtggcctgaccttgggcatgaag
ctggaaaactggccacccgctggcctggaaaagcgttaa
DBGET
integrated database retrieval system
