Thermochaetoides thermophila: CTHT_0016910 Help Entry CTHT_0016910      CDS       T03100                                  Name (RefSeq) hypothetical protein   KO K12600   superkiller protein 3 Organism cthr  Thermochaetoides thermophila Pathway cthr03018   RNA degradation Brite KEGG Orthology (KO) [BR:cthr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CTHT_0016910  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cthr03019]     CTHT_0016910 Messenger RNA biogenesis [BR:cthr03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ski complex      CTHT_0016910 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_19 TPR_16 TPR_2 TPR_14 TPR_22 TPR_8 TPR_1 TPR_17 TPR_CcmH_CycH TPR_12 TPR_11 TPR_7 ARM_TT21_5th TPR_6 TPR_9 ARM_TT21_C ANAPC3 TPR_Slam DUF3239 DUF4919 CM_2 Motif Other DBs NCBI-GeneID:  18255729 NCBI-ProteinID:  XP_006692193 UniProt:  G0S2E1 LinkDB All DBs Position Unknown AA seq 1433 aa AA seqDB search MSSVKALLRAINDAIKQQKWDAAIEAAEDVFQKDPKNYQAHIFLAFALDKKNKLDEAEKT YLAAAALKPGDSQAWQGLIKLYQRQKNKKLKEYQRTAVRLAEIYHDANELYKCRDVIDKF VDHARTQGDRLQYVDALDVILPGSPIYSVLEGSVPAPGKTYELQAQIVEAEEKKRINTLI GERRTRIGARVAEVTIETKREVYSQSRLLEIYQNVINWATDDDVRRTYEEKQLQYCYDRM LAWPPGEQKDQEAATVRRLANDMVIIRHPFKFAWDIAINWQDNKEVKQWDPAVLRQYCTF FPDSDLSRVIMGYLTSEISPFPKESAQPTQQTALAESDEDESEDDEEGGGVPTTYVPLTE EDRLAMFMEGSSSADSLFALRLTAEYYLHIEEHEMNVELMRKAVEHLKLERSRTGFRFQH TEDAFSLALGTSLVFYQSPRHHQEAKALFDKVLSHDPSSTPALIGVGLIYEEEEEYTEAI GFLERALQRDPSNLRVRTEAAWVKALNGDFATAKAELQACLPQLEKAKNQKELLAQTQYR VGHCIWNLDTSKAARKSRTGAYAYFLEALKNNLNYAPAYTALGIYYADYAKDKKRARRCF QKAVELSPSEVYSAERLARSFADDGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFAA LGVAELNKQDYRKAIVSFQAALRIAPEDYHSWVGLGEAYHGSGRYIAATKAILNAQRLEE TARDKIQGETWFSRFILADIKRDLGEFDEAIALYKAVADEHPDEQGVVIALMQAMVESAM DSLDKGFFGKAVDLAKETLKVASQACRAIQETFNFWKAVGDACSIFSSVRGRLSEFPLDI VQQILSDEDLAPSNGVPGDQTDSSLLYTVLQATITSHTRAIQASAHDVHAQAVAHYNLGW AEFRAHTCLPSQKKASPHLKTAIACFKRAIELEAGNAEFWNALGVVTSTVNPAVAQHAFV RSLHINEAGAHVWTNLGALALLQGDVQLANEAFTKAQSADPDYAHAWLGQGLVALLVGDV KEARGLFTHAASIAEASSRPVRRHYAVAMFDMLLAARGAALPITALLQPLLALSQLAALE PGELGFSHLLGLMQERNGEPRRAVETLEGVCGRLEERYERTEAATDLKHFAIAKADLARA RLAAGEYEAAVEDAEMALQLSEEGSELTAEERARVRLSAHVTTGVAKYFLQSPAEAVTAL DAALDESNSDPDVACLLAQILWAEGSEASRERARDVLFGVVEATSPPHVRAVVLLGVIAL LDGDEEGLEAVVSELQGLRGAGTSDGDGQGQGKGLSVTEMEDIGIVLRAVAGLGSLTTET STEVVTAQDQKASQARQDVMYHPWLPHGWSGLAASARASATDDEGEELGRSAAEMALRVA VKGVPPRGELEAEDLAKAYAGTGRVRDAQVAVWIAPWCGEGWASLRGGVAGKA NT seq 4302 nt NT seq  +upstreamnt  +downstreamnt atgtcgagcgtcaaggccctcctccgggccatcaacgacgccatcaagcagcagaagtgg gatgctgccattgaagcggccgaagatgtgttccagaaggaccctaagaactaccaggcc cacatattccttgccttcgccctcgacaagaaaaacaagctcgacgaggccgaaaagacg tacctggccgcagccgccctcaagccgggcgactcgcaggcctggcagggcctgatcaag ctgtaccagcggcagaagaacaagaagctcaaagagtaccagcgcacggccgtgcgcctc gccgagatctaccacgatgccaacgagctgtacaagtgccgggacgtcatcgacaagttt gtcgaccatgcccgcacccagggcgaccgcctgcagtatgtcgatgcgctcgatgttatt ctgcctggaagtccgatctactctgtccttgaggggagcgtgccggcgccgggaaagacg tacgagctgcaggcgcagattgtggaggcggaagagaagaagagaatcaataccttgatt ggcgagcgtcgaacgaggattggcgcccgcgttgcggaggttacgatcgagaccaaacgc gaggtgtacagccagagccggctgctggagatttaccagaatgtaatcaactgggcgacc gacgacgatgtgcggcgcacatacgaggagaagcagctgcagtactgctacgaccgcatg ctagcctggccgccgggcgagcagaaggaccaggaagcggcgacagtccgccgtctggcc aacgacatggtgattattcggcacccgttcaagttcgcctgggatatcgccatcaactgg caggacaacaaggaggtcaagcagtgggatccggccgtcctgagacagtactgcaccttc ttccccgacagcgacctgagccgggtgattatgggttacctgaccagcgagatctcgccg ttccccaaggagagcgcccagccaacgcagcagacggcgcttgcggagagcgacgaggac gagagcgaagacgatgaggagggcggcggcgtgcccactacgtacgtgccgctgacggag gaggatcgtctggccatgttcatggagggctccagcagcgccgactcgctgtttgccttg aggctgacggctgagtattatctgcacattgaggagcacgagatgaatgttgagttgatg cgcaaggccgtcgagcatctcaagctggagaggtcccggactggctttcgcttccaacat accgaggacgccttctccctggcgctgggcacatcgctggtcttctaccagtccccgcgt catcatcaagaagccaaggcgctcttcgacaaagtgctctctcacgacccgtcatccacg cccgcccttatcggcgtcggcctgatctacgaggaagaagaggagtacaccgaagcgatt ggcttcctcgaacgtgccctccagcgcgacccatccaacctccgcgtgcgcaccgaagcg gcctgggtcaaggccctcaacggcgacttcgcaaccgccaaagccgagctccaggcctgt ctcccccagctcgagaaggccaagaaccaaaaagaactcctcgcccagacgcagtaccgt gtcggccactgcatctggaacctggacacatccaaggcggcgcgcaagagccggaccggg gcatatgcctacttcttggaggcactcaagaataatctgaattacgcccccgcctacacc gcgctgggcatttattacgccgactacgccaaagacaagaagcgcgcgcgtcgctgcttc caaaaggctgtggagctgtcgccgtcggaggtctactccgcagagcgcctggcccggtcc ttcgccgacgacggcgactgggaccgtgtcgaactcgtcgcgcagcgggttgtggactcg ggcaaggtcaagccgccgccggggtccaagcgcaaggggattagctggccgtttgcggcg ctcggtgttgctgagctcaacaagcaggactatcgcaaggcgatcgtctcgttccaggct gcgctgcggattgcgcccgaggattatcattcgtgggttggcctgggtgaggcgtatcat ggctctgggaggtacatcgccgcgacaaaggcgattttgaatgctcagcggttggaggag actgctagggataaaatccagggggagacgtggtttagtcggtttatcctggctgatatc aagcgggacttgggggagttcgatgaggcgattgcgctgtacaaggctgtggccgacgag catcccgacgagcagggcgtcgtcatcgcgctgatgcaggctatggtcgagagcgctatg gacagcctcgacaaaggcttctttggcaaggcggtcgacctggctaaggaaacactcaag gtcgcctcgcaagcctgccgcgccattcaggagacattcaacttctggaaggccgtcggc gacgcctgctcaatcttctccagcgtgcgtggccgtttgtccgagttccccctggacatt gtccagcagattctctccgacgaggatctcgcccccagcaacggcgtccccggagaccaa acggactcgtccctcctctataccgtcctacaggcaaccatcacctcccacacccgcgcc atccaagcctccgcccacgacgtccacgcccaggccgtagcacactataacctcggctgg gccgaattccgcgctcatacctgcctgccttcccaaaagaaagcctccccgcacctcaaa accgccatcgcctgcttcaaacgtgccatcgagctcgaggcaggcaacgccgagttctgg aacgccctgggcgtcgtcacgtctactgtcaaccccgctgtggcacagcatgcctttgtc cgcagtctgcatatcaatgaggccggtgcacacgtctggaccaatctgggagccctcgcc ctgctgcagggggatgtccagttggcgaacgaggccttcactaaagcgcagagcgccgat ccggattacgcgcatgcttggctcggccagggactggttgccctgctcgtgggcgatgtg aaggaggcgaggggattgtttacgcatgcggcgtcgattgcggaggcgtcgtcccgcccg gtgaggagacactatgcggtcgcgatgttcgatatgctgttggcggctcgcggggctgcg ttgccgattacggcgctgctgcaaccgttgttggcgctgtcgcagctggcggcgctcgag ccgggggagttagggtttagtcatttgctggggttgatgcaggagaggaatggggagccg aggagggcggttgagacgctggagggggtgtgtgggcggttggaggagaggtatgagcgg acggaagccgctacagacctgaagcactttgctattgcgaaggcggatctggcgagggca cggcttgcggcgggggagtatgaggctgcggttgaagatgcggaaatggcgctgcagctg tcggaagagggatctgaactcacggctgaggagcgggcccgtgtgaggttatctgcacat gttacgacgggagtggcgaagtacttcttacagtcccctgctgaagcggttactgcgctg gacgcggcgctggacgagtccaactctgaccccgacgtcgcttgtctactggcacaaatc ctctgggctgaagggagcgaagcctcccgcgagcgggcaagagatgtgctgtttggcgtg gtggaagccacttcccctccgcacgtgcgtgccgtggtcttgttaggagtcattgccttg ctggacggggatgaagagggtctcgaggcggttgtgtctgaactacagggcttacgtggg gccggcacctcggatggcgatggccaaggccaagggaagggtttgagtgtcacggagatg gaggacatcggtatcgtgttgcgcgccgttgcgggtttaggtagcctcacgactgagacc agcactgaagtggtcacggcccaagaccaaaaagcctcccaagcccgtcaggacgttatg taccatccctggctgccgcacgggtggtctgggttggccgcctctgcacgggcctctgct actgatgatgaaggtgaagagctggggaggtctgcggcagagatggcattgcgagtagct gttaagggtgtgccgcccagaggggaactggaggcagaggatttggcgaaggcgtatgcg ggtaccgggagagtgagagatgcgcaggttgcggtgtggatcgcgccttggtgtggggag gggtgggcaagtttgagggggggtgttgctgggaaggcttag

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