Crotalus tigris (Tiger rattlesnake): 120307944
Help
Entry
120307944 CDS
T08476
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120307944 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120307944 (CSTF1)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120307944 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
VPS8_N
PROPPIN
Beta-prop_WDR11_1st
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_SPT8
Frtz
Motif
Other DBs
NCBI-GeneID:
120307944
NCBI-ProteinID:
XP_039199199
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MIMTERMSSRRITPPCDRRQLPWGMTGMDSPTGELRPMRLPFLEADPRLQSMCGGSMQQP
VRRSGPRARLLLPPPPPPPQPPPPLPPAPLHLPAQSPLDAVGPPAALLSGDRSRTKDGLI
PGRQPLFTMYRPKVSLKDRQQLYRLIISQLLYDGYINIANGLINEVKPQSVCAPSEQLLH
LIKLGMENDDSAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCR
VATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDH
VDEVTCLAFHPNEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFI
LVGTQHPTLRLYDVNTFQCFVSCNPQDQHTDAICSVNYNASANMYVTGSKDGCIKLWDGV
SNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGR
QVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGF
MTCSDDYRARFWYRRSTTD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgattatgacagaaagaatgtcaagtcgtcgtatcactccaccatgtgacaggcggcag
cttccatggggcatgactggcatggactcacccactggtgaactgcggccaatgagatta
ccatttcttgaagccgatccgcggcttcaatcgatgtgtggaggctcgatgcagcagcct
gttcgacggagcggtcctcgggccagactgctgctaccgccgccgccgccaccaccacaa
ccgccgccacccctgccgcccgctccgcttcatctgcccgcccagtcgccccttgacgcc
gtcgggcccccagcagcccttttgagcggagatcgatcgcggacgaaggacgggctgata
cctggaaggcaacctttgttcacaatgtataggccaaaagtaagccttaaagaccggcaa
caactttacaggcttattattagtcaactgttatatgatggatatatcaatattgctaat
ggtctgataaatgaagtaaagccacaatctgtctgtgcaccctctgaacaactgttgcat
cttattaaactaggaatggaaaatgatgatagtgcagttcagtatgcaattggacgctct
gatacagtagctcctggaactggaattgacttggagtttgatgcagatgtacagactatg
tccccagaagcatctgaatatgagacgtgttatgtcacatctcacaaaggaccatgtcgt
gtagctacatatagcagagatggacagttaattgctacaggatcagctgatgcatcaata
aaaatacttgataccgaaagaatgttagcaaaaagtgctatgcccattgaggttatgatg
aatgaaacagctcagcaaaacatggagaaccatccagttattaggactctttacgatcat
gtagatgaggtcacctgtttagcttttcatccaaatgaacaaatccttgcatctggatca
agagactacactctgaaattatttgactattcaaaaccatctgccaagagagctttcaaa
tatattcaggaagcagaaatgctgcgctctatatctttccatccttctggagatttcata
cttgttgggacacagcatcctaccctgaggctctatgatgttaatacttttcagtgcttt
gtatcttgcaatcctcaagatcaacatacagatgctatatgctcagttaattacaatgca
agtgctaacatgtatgtaacaggcagcaaagatggatgcatcaaattgtgggatggagtt
tcaaatcgttgtatcaccacttttgagaaggcacatgatggtgctgaagtctgttctgcc
attttctctaagaattccaagtacatactttcaagtggaaaggattctgtggctaaactg
tgggagatatcaacagggaggacactagtcaaatatacaggagctggcctgagtggacgc
caggttcataggacacaggctgtttttaatcacaccgaagactatgtgctccttccagat
gaaaggaccattagcctttgctgctgggattcacgaacagcggaacgaagaaatcttctt
tccttggggcataacagcatagttcgctgcattgtccattcgcctacaaatcctgggttt
atgacttgcagtgatgactatagagctcgattttggtaccgaagatcgaccacagattaa
DBGET
integrated database retrieval system
