Crotalus tigris (Tiger rattlesnake): 120311308
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Entry
120311308 CDS
T08476
Symbol
CACNA1F
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04010
MAPK signaling pathway
ctig04020
Calcium signaling pathway
ctig04260
Cardiac muscle contraction
ctig04261
Adrenergic signaling in cardiomyocytes
ctig04270
Vascular smooth muscle contraction
ctig04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120311308 (CACNA1F)
04020 Calcium signaling pathway
120311308 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
120311308 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
120311308 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
120311308 (CACNA1F)
04270 Vascular smooth muscle contraction
120311308 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120311308 (CACNA1F)
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120311308 (CACNA1F)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
DUF4834
DUF4520
HemY_N
Motif
Other DBs
NCBI-GeneID:
120311308
NCBI-ProteinID:
XP_039206587
LinkDB
All DBs
Position
Unknown
AA seq
2058 aa
AA seq
DB search
MGKMVFKMSKSDCNGESLGSPEAPPQSATEAFVEASGQAIAWTLTSGCSDTLGSTGSLAQ
KKRQQHNKHKTQGSNVVHRSPRALFCLHLNNPIRRAAISIVEWKPFDILILMTIFANCVA
LGVYIPFPEDDSNVSNHNLEQVEYIFLIIFTVETFLKILAYGLVMHPSAYIRNGWNLLDF
VIVVVGLFSVILEQVSHKPGEAHHMSGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLN
SIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFIIDSDLEAEEDPSPCAFSGH
GRECTVNNSECRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAVGHELP
WVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLKGYLDWI
MQAEDIEPDEEKDVAVADLTEKKRKKKWLRHRSHSSDSRTSLPASESTSVNTENVEDEEH
LQSHCYDVCLGKLSKTKFGRHVQRINRLFRKKCRLAVKSVSFYWMVLLLVFLNTLTIASE
HYKQPYWLTQIQAYANKVLLSLFTLEMLLKMYSLGLQAYFVSFFNRFDCFVVCGGILETV
LVEFEIMQSLGISVLRCVRLLRIFKITRHWASLSNLVASLLNSMKSIASLLLLLFLFIII
FSLLGMQLFGGKFNFDETQTKRSTFDTFPQALLTVFQILTGEDWNAVMYDGIMAYGGPYF
PGMLVCIYFIILFICGNYILLNVFLAIAVDNLADGDNMNSSKEEKQTPGEGEQNKDKKEK
LEGGEEEEEEEEEAVEEGNERAGEEEAEDQQSLAESHLEKLEDTPKEKVVPIPDGSAFFC
LSKTNPLRVGCHKLIHHHIFTNLILVFIILSSISLAAEDPIRTHSFRNNILGYFDYAFTS
IFTVEILLKMTAYGAFLHKGSFCRNWFNLLDLLVVSVSLISFGIHSSAISVVKILRVLRV
LRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYSCTDEA
KHTPVECKGTFIVYKDGDVAHPMVRDRMWLNSDFNFDNVLSGMMALFTVSTFEGWPALLY
KAIDANAENQGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFRAQGEQEYKNCEL
DKNQRQCVEYALKAQPLRLYIPKNKYQYKFWYMVNSTCFEYIMFVLILLNTIALAVQHYE
QSEPFNYVMDLLNMVFTGLFTVEMFLKIIAFKPKHYFVDAWNTFDALIVVGSIVDIAVTE
INSSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIAMIFFI
YAVIGMQTFGKVAMQDNTAINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCDP
ESDYEPGEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLD
EFKRIWSEYDPAAKGYIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGT
VTFNATLFALVRTSLKIKTEGDLDIANRELRSVIKKIWKRTKPKILDEVLPITEGEEITV
GKFYATFLIQDYFRKFRKRKERGLLGSDGSPSKSSALQAGLSCLQDLGPEIRRAMSCDLE
GKEEEEVEEKIIEEETVIYKSSEMNSEAPDYHISVAATPTEQEDKTVASQQLSKTSSSHA
LNGLKPYEENVSGSDEPADLPVVSIQHRINRQRSSGSCFPPTLEEVVNHTEVCIEDTSAE
QGNYSQEEDSENLPAHEKQSHLHNSQPQRHHWQRGYGGSLPLLSHRLNSGLVKGMPEGRQ
TKRRRLLPATPTGRKPAFSIQCLQRQDSCDDIPIPGTYHQKAPLGRTHVQSHQGYGRYSS
WHSGSRTSTSSSQSWATPPKRGRLLYAPLILVEEERVQGYSWEKNSSSLPPMSQAHWYRN
EPELTCHTYGSLKVPGPLLHGSSGRSGSADSLVEAVLISEGLGLYAQDPNFVAFTKREIA
DACHMTLDEMESAATHLLSRTSGGGDSSGRGGGSHLLYSSDGEHSGAESLGLVYSDEESF
RSREEEDLADEMICITTY
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatggtcttcaagatgtctaagtcggactgcaatggagaatcattgggctct
ccagaggcaccacctcaatcagcaaccgaggcttttgtggaagcatcaggccaggccata
gcatggacgcttacgagtgggtgttcagatactttgggctctactggcagccttgctcag
aagaagcgtcagcagcataacaagcataagacccagggctccaacgtggtgcaccgttca
ccacgagccctcttctgcctacatttgaacaatcccatccgcagagctgctatcagcata
gtagagtggaaaccctttgatatcctcatccttatgacaatctttgctaattgtgtggcc
ttaggagtctatattccctttccagaggatgattccaatgtctccaaccacaacttggaa
caagtggaatatatttttcttatcatcttcacagtggaaactttcctcaagatccttgct
tatggtttggttatgcatcctagtgcttatattcgcaatggctggaatcttcttgatttt
gtgattgttgtagtgggtctcttcagtgtcattctggaacaagtctcccacaagcctggg
gaggcccatcacatgagtgggaagccaggcggctttgatgtcaaagccctgcgagctttt
cgtgtcctgcgacctctgcgtctagtctctggtgttcctagcctgcatattgtcttgaat
tctatcatgaaagccatggtgccccttctgcacatagcgctacttgttctttttgtcatc
attatctatgccatcattggcttggagctcttcattggtcgtatgcacaagacctgcttc
atcattgattcagatctggaggctgaggaagacccgtcaccttgtgctttttctggacac
ggtcgggaatgcacagtaaacaatagcgaatgtcgtggcaagtgggagggacccaatggt
ggaatcaccaattttgacaacttcttttttgccatgcttactgtcttccaatgcattacc
atggaaggttggactgatgttctctactggatgcaagatgcagtgggtcatgaactacct
tgggtttattttgtcagccttgtcatctttggctctttctttgtgcttaatttggttttg
ggtgtgttaagcggggaattctctaaggaacgagagaaggcaaaagcccggggagacttc
caaaagctacgagagaaacagcagatggaggaagatctgaagggctatctggattggatc
atgcaagcagaagacattgagcccgacgaagaaaaagacgttgctgtggccgacttgacg
gaaaagaagaggaagaagaaatggctcaggcatcgcagtcattcctccgacagccgcacc
agtcttcctgccagcgaaagtacctcagtcaacacggagaatgttgaagatgaagagcac
cttcagagccactgctatgatgtgtgtttaggaaagctttccaagaccaaatttggccgc
catgtacagcgcatcaacaggctttttcggaagaaatgccgtttggctgtcaaatctgtc
tctttctactggatggtcctgctccttgtgtttctgaataccctcactattgcttctgaa
cattacaagcagccttattggctgactcaaattcaagcatacgctaacaaagtattgttg
tcactgttcaccctggagatgctgctgaagatgtacagcctaggcctccaagcctatttt
gtcagcttcttcaatcgttttgactgttttgtggtatgtggtgggattttggagactgtc
ctggtagagttcgagatcatgcaatcccttggaatctccgtgctccgctgtgtccgcctc
ctgagaatcttcaaaataactaggcattgggcctcactgagcaaccttgtggcttctttg
ctgaattccatgaagtccattgcctccttacttctactgctgttcctcttcattatcatc
ttctccttgctaggcatgcagctatttggtggcaaatttaactttgatgagactcagacc
aaacgcagtacctttgacactttcccccaggccttgctcaccgtcttccagatactgaca
ggggaagattggaatgcagtgatgtatgatgggatcatggcctatggcggcccctatttt
cccggcatgctagtctgcatctatttcatcattctctttatttgcggcaactatatctta
cttaatgtcttcctggctattgcagtggacaatcttgctgatggagacaatatgaattcc
tccaaggaagagaaacagacaccaggagagggagaacagaacaaagataaaaaggagaag
ctagaaggtggtgaggaagaggaggaagaggaggaggaggctgtagaagaaggcaatgaa
cgagcaggagaggaagaggcagaagatcagcagagcttggcagagtcccacctagaaaaa
ctggaagacactcccaaggagaaagttgtaccaattcctgatggaagtgcctttttttgc
cttagcaagacaaacccccttcgtgttgggtgccacaagctgatccaccatcacatcttc
accaacctcatccttgtcttcatcattcttagcagcatctctttggcagctgaagacccc
atccgaacacactccttccgcaacaatattttgggctactttgactatgccttcacttct
atcttcactgttgagatcttgctcaagatgactgcatatggtgccttcctgcacaagggc
tcattctgccggaactggtttaacctcctggatctgcttgttgtcagtgtctcactcatc
tcttttggcatccactccagtgccatctctgtggtgaagatcttgcgggtactgagggta
ctacgtcctctccgagccatcaaccgagccaaggggttgaagcacgtggtacaatgtgta
tttgtagcaatccgcaccattggaaatatcatgattgtcaccaccttgctgcagttcatg
tttgcttgcattggtgttcagttgttcaagggcaaattctatagctgcacagatgaggcc
aagcataccccagttgagtgcaaaggcacattcattgtgtacaaagatggagatgtggct
cacccaatggtgcgtgaccggatgtggctcaacagtgacttcaacttcgacaatgtgcta
tcaggcatgatggccctcttcactgtctccacttttgagggatggccagcgctcttgtac
aaagctattgatgccaatgcagaaaaccaaggaccaatatacaattaccgggttgagatc
tccatcttcttcattgtttacatcattatcattgccttcttcatgatgaatatctttgtg
ggctttgtcatcatcactttccgggcccaaggagagcaggaatacaaaaactgtgagctg
gacaagaaccagcggcaatgtgtggaatatgccttgaaggctcaacccttacgactctat
atcccaaagaacaaatatcagtacaaattctggtatatggtcaattccacttgttttgaa
tacatcatgtttgtactgatcctgctgaacacgattgctttggctgtacagcactatgaa
caatcggagccttttaattacgtgatggatctgctcaatatggtgttcacaggcctcttc
actgttgaaatgtttctgaagattattgccttcaagcccaagcactactttgttgatgca
tggaatacctttgatgctttgattgtggtcgggagtatagtagacattgctgttactgaa
atcaacagctcagaggacagttcccgtatctctatcaccttcttccgccttttccgtgtc
atgcgcctggtcaagctcctcagcaaaggtgagggtattcgtaccctcctctggactttc
atcaaatctttccaggctttgccatatgtggccctcctcattgccatgattttctttatt
tatgctgtcatcggcatgcagacctttggcaaagtagctatgcaagataatacagccatc
aatcgcaacaataatttccagacttttccacaagctgtgttgctgcttttcaggtgtgcc
acaggagaagcctggcaggagatcatgctggccagcttgcctggcaagcgctgtgaccct
gagtctgattatgaacctggggaagaattcacttgtggtagcaactttgctattgtctat
tttatcagcttctttatgctgtgtgctttcctgatcattaacctctttgttgctgtcatc
atggacaattttgactatctcactcgggactggtccattctgggtccccatcacctcgat
gagttcaagaggatctggtcagaatatgatccagctgccaaaggttacatcaagcatctg
gatgtggtgactctgttgcgccggatacagccacctctaggttttgggaagctctgtccc
caccgagtagcctgcaaaaggctggtggccatgaacatgccattgaactcagatggaact
gtcactttcaatgccaccctctttgctctggtgcgtacatcactaaagatcaagacagaa
ggagacctggatatagccaatagggaactccgttctgtcatcaaaaaaatctggaaacgg
actaagcccaaaatactggatgaggtgttacctattacagaaggggaggagataactgta
ggaaaattctatgccacattcctgatccaagattatttccgtaaatttcgtaagcgtaaa
gaaaggggactgcttggatcagatggatcccccagcaagtcctctgccttgcaggctgga
ctgagttgcttacaagatctagggcctgagatccgcagagcaatgtcctgtgatctggaa
ggaaaagaggaagaagaagttgaggaaaaaatcattgaggaagaaacagtcatttacaag
agttctgagatgaatagtgaagcccctgactaccatatctcagttgctgcgactccaaca
gaacaagaagacaagactgtggcctctcagcagctctctaagaccagctcctcccacgcg
ttaaatggattgaagccctatgaagagaacgttagtggcagtgatgagcctgctgacttg
cctgttgtttccattcaacacaggataaacaggcaacgctccagtggcagctgctttcca
ccaacactagaagaagtagttaaccatactgaagtttgtatagaggacacctcagctgag
cagggaaactatagccaggaggaagactctgaaaacctgcccgcccatgagaagcagtct
catctgcacaactctcagccccagcggcatcactggcagaggggctacgggggttctctg
cctctgctctcccatcggctcaacagcggactcgtcaaaggaatgccggagggcaggcaa
accaagcgccggcgcctcttgcctgccactcccacaggccgcaaaccagccttcagcatc
cagtgcctgcagcgccaagacagctgcgatgacatccccatcccaggcacctaccaccaa
aaggcacccctgggccgaacacacgtgcagtcccaccagggctatggcaggtacagctca
tggcacagtggcagccgcacttcaacatcttcctcgcaatcatgggccacgcctccaaag
aggggccggctgctctacgctccattgatcctagtggaggaggagagggtgcaaggatac
agctgggaaaagaatagcagcagccttccgcccatgtcacaggcccactggtacaggaac
gaacccgagctgacctgccatacctacggcagcctcaaggttccaggcccgctcctgcac
ggctccagtggcagatctggcagcgcagatagtctggtggaggcggtgctcatctccgaa
ggcctaggcctgtatgcacaggacccaaattttgtggcctttaccaagcgggagattgct
gatgcctgccacatgactctggatgaaatggaaagcgccgccacacacttgttgagtcgc
acgtctggtggtggtgacagcagcggccgaggtggtggaagccaccttctgtacagcagt
gatggggaacacagtggagctgagagtctaggccttgtttatagtgatgaagaaagcttc
cgttcccgtgaggaagaggacttggctgatgagatgatatgtatcaccacttattga
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integrated database retrieval system
