Crotalus tigris (Tiger rattlesnake): 120312281
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Entry
120312281 CDS
T08476
Symbol
SCN2A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120312281 (SCN2A)
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120312281 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
HB_ELP1
FraC
Neur_chan_memb
Lustrin_cystein
IQCJ-SCHIP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
120312281
NCBI-ProteinID:
XP_039208732
LinkDB
All DBs
Position
Unknown
AA seq
2071 aa
AA seq
DB search
MAQSVLVPPGPDSFHFFTKESLAAIEQRIAEEKAKKSKQERKDVDDDENGPKPNSDLEAG
KSLPFIYGDIPPGMVSEPLEDLDPYYLNKKTFIVLNRGKAIFRFSATSAVYLLTPFNPLR
KIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGF
CLEGFTFLRDPWNWLDFTVITFAYITEFVNLGNVSALRTFRVLRALKTISVIPGKEWXLT
KCQAPGISSCFLCAVIVFVCELPYYRYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLIWPPDNSTFEINVTSYF
NSTMGENGTYVNTTVTTFNWDDYVSDDSHFYFLEGQNDALLCGNGSDAGQCPEGYMCVKA
GRNPNYGYTSFDSFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYL
INLILAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAALAAAAGESREFS
EVGGVGGFSESSSATSKLSSKSAKERKNRRKKRKQREQSEGDEKDEDEFHKSESEDSIHR
KGFRFSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSKTSLFSFRGRAKDLGSENDFA
DDEHSTFEDNESRRDSLFVPHRHCERRNSNISQASRSSRVMPILPANGKMHSTVDCNGVV
SLVGGPPPLMSPAGQLLPEGTTTETELRKRCSSSYHMSMDFLSDPTARQRAMSIASILTN
TMEELEESRQKCPPCWYKFANMCLIWDCWTPWLKIKHIVNLIVMDPFVDLAITICIVLNT
LFMAMEHYPMTQQFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGIIVSL
SLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKNYKECVCKISNDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEV
AGQPLCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKG
IDFIKRKVHEFVQKAFVRKQKALDEIKPLEDLNNKKDSCISNHVIVDIGKDFNYLKDGNG
TSGIGSSVEKYIIDESDYMSFINNPSVTVTVPIAVGESDFENLNTEEFSSESDLEESKEK
LNASSSSEGSTVDVGLPQVGEQPEAEPEESLEPEACFTEGCIRKFNCCQVSVEDGKGKLW
WNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFI
LEMLLKWVAYGFQVYFTNAWCWLDFLIVDVSIVSLTANALGYSELGAIKSLRTLRALRPL
RALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGEM
FSIDEVDNQTECENLIEKNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDS
RNVEKQPHYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTMMVETDD
QTDAMETNLYRINLIFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAEI
IEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
AIFGMSNFAYVKREVGIDDLFNFETFGNSMLCLFQITTSAGWDGLLAPILNSGPPDCDPE
IDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDD
FEMFYEVWEKFDPDATQFIEFAKLSDFAASLDPPLLIPKPNKVQLIAMDLPMVNGDRIHC
LDILFAFTKRVLGESDEMDALRIQMEDRFMAANPSKASYEPITTTLKRKQEEVSAVIIQR
AFRRYLLRQKVKKISHMFNKDRIKEGNDTVIKEDMIIDKLNENSTPEKNDMTPSTTSPPS
YDSVTKPDKDKYEKDKSEKEDRGKDVRDYKK
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttccacttttttacgaaagag
tcactggcagctattgaacaacgcattgccgaggaaaaggctaagaagtccaagcaagag
cgcaaagacgttgatgatgatgaaaatggaccaaaaccgaatagcgatttggaagctggc
aaatcactgccctttatatatggagacatacctcctgggatggtgtctgagccactggag
gacctggacccctattaccttaacaaaaaaacatttatagtgttgaatagagggaaggca
atattccgattcagtgccacatctgctgtatacctgttaactcctttcaaccctcttaga
aaaatagctatcaagattttggtacattcattattcagtatgcttattatgtgcactatt
ttgaccaactgtgtatttatgaccatgagtaatcctccagaatggacaaagaatgtagaa
tacacgttcactggaatttatacctttgaatcactaataaaaattcttgcaaggggcttc
tgtttagaaggtttcacgttcctccgggatccctggaattggttggatttcacagttata
acatttgcgtatataacagaatttgtaaacctaggcaatgtttcagctcttcgaactttc
agagtattgagagctttgaaaactatttctgtaatcccaggtaaggagtggnncttgacg
aagtgccaggcccctggtatttccagctgttttttgtgtgctgtcattgtgtttgtatgt
gaactcccctattacagatatgtgacagaatttgtggacctgggcaatgtctcagcgttg
agaacattcagagttctccgggcattgaaaacaatatcagtcattccaggcctgaagaca
attgtaggggccctcattcagtctgtgaagaagctctcagatgtcatgatcttgaccgtg
ttttgtctgagtgtatttgcactaatagggctccaacttttcatggggaacctgaggcac
aaatgcctgatttggccacctgacaattctacttttgaaataaacgtcacttcctacttc
aatagcacaatgggagaaaatggtacctatgtaaatacgacagtgaccacttttaactgg
gacgattatgtcagtgatgacagtcacttttacttcttggaaggacaaaatgatgctttg
ttgtgtggcaacggttcagatgcaggtcaatgtccagaaggatatatgtgtgtaaaagcg
ggtagaaaccccaactatggctatacaagttttgattccttcagctgggccttcttgtca
ctctttcggctgatgactcaggactactgggaaaatctttaccaactgactctacgtgct
gctggcaaaacatatatgatcttttttgtcctggtgattttcttgggttctttctacctg
atcaacttgatcctggctgttgttgccatggcctatgaagagcagaatcaagccaccatg
gaagaagctgagcagaaagaggcagagttccagcagatgctggagcagctgaaaaaacag
caagaagaggctcaggcagcagctttagccgcggcggcgggtgaatcaagagaatttagt
gaagttggtggtgtgggtggattctcagaaagttcttcagcaacatcaaaactgagttcc
aagagtgcaaaggagaggaagaacaggcggaagaagagaaaacagagagaacagtctgaa
ggagatgagaaagatgaggatgaattccacaaatcagaatcagaggacagcattcacaga
aaaggctttcgattctctattgaagggaacagattaacctatgaaaaaaggttttcttcc
ccacaccagtctttgctgagcatccgcggatcgctgttttcccccaggcgcagcagcaaa
acgagtctcttcagcttcagaggccgagcaaaggatcttggatcagagaatgactttgct
gacgacgagcacagcacttttgaagacaacgagagtaggagagattccctctttgttcct
caccggcattgtgagcgtcgcaacagtaacatcagtcaggccagccgatcctccagggtg
atgcccatccttccagcaaatgggaagatgcacagcactgtggactgcaatggggtggtt
tccttagttggcgggcctcctcctcttatgtcacccgctgggcagcttcttcctgagggc
accactacagaaacagaactaagaaaaaggtgctccagttcctaccacatgtcaatggat
tttctctctgatcctactgcaaggcaaagagcaatgagcatagctagcatacttaccaac
acaatggaagaacttgaggaatccaggcagaagtgccctccctgctggtacaaatttgct
aacatgtgcttaatctgggattgctggactccttggctgaaaataaagcatattgttaat
ttgattgtgatggatccatttgttgaccttgctattaccatctgcattgttttaaatact
ttgtttatggcaatggagcattacccaatgacccaacagtttaataatgtactatccgtt
ggaaacttggtgtttactggcatcttcacagcagaaatgtttctcaaaataattgccatg
gatccttattattatttccaagaaggctggaatatttttgatggcatcatagtcagcctg
agtttgatggagttgggtcttgcaaatgtggaaggattatcagttctaagatccttcaga
ttgcttcgagttttcaaactggcaaaatcttggccaacattaaacatgttgataaagatt
attggcaattcagtaggtgccttgggaaatttgactttggttttggctatcattgtcttc
atttttgccgtggttggaatgcagttgtttggcaaaaactacaaggagtgtgtctgcaag
atttccaacgactgtgaactcccacgctggcacatgaatgatttttttcattctttcttg
attgtctttcgagttctttgtggagaatggatagagactatgtgggactgtatggaggtt
gctggacagcccctgtgccttactgtcttcatgatggtcatggtgattggcaatttagtg
gttttgaatctttttctggccttgctcctgagctccttcagttcagacaatcttgctgct
acagatgatgataatgaaatgaacaacctccagattgcagtggctaggattcagaaagga
atagattttataaaaagaaaagttcatgaatttgtacaaaaagcattcgtgagaaaacaa
aaagctttggatgaaatcaagccccttgaagatctaaacaataagaaagacagttgcatt
tctaatcatgtaatagtagatattggcaaagattttaactatctgaaagatggcaatggg
accagcggcatagggagcagcgtggaaaaatacatcattgatgaaagtgattacatgtca
ttcataaataacccaagtgtaactgtgacagtacccattgctgttggagaatcagatttt
gaaaatttaaatacagaggagtttagcagtgagtcagatctggaagaaagcaaagagaaa
ctaaatgcatctagttcatctgaaggtagtacagttgatgttggacttccccaagttgga
gaacaaccagaagctgaacctgaagaatctcttgaaccagaagcctgttttacagaaggc
tgcatccggaaattcaactgctgccaagtcagtgtagaagatggcaaaggaaaattgtgg
tggaatcttcggaagacttgttacaaaatcgtagaacataattggtttgagacttttatt
gtcttcatgattctccttagcagtggtgctctggctttcgaagacatatacattgagcag
cgcaagactatcaagactgtactggaatatgcagacaaggtcttcacctacatctttatt
ttagaaatgcttctaaagtgggtggcttatggctttcaagtatatttcaccaatgcctgg
tgctggctggatttcctcattgttgacgtctctattgttagcttaacagcgaatgccttg
ggctactctgaacttggtgcaattaaatctcttaggactttaagagctttaaggcctcta
agagccttgtcacgattcgaaggaatgagggtagtggtgaacgctctcttgggagcaatt
ccatctatcatgaacgtgcttcttgtatgccttatattctggctaatctttagcattatg
ggagtgaatctctttgctggcaagttctaccactgtgttaataccacaactggggaaatg
ttcagcattgatgaagttgacaatcagactgagtgtgagaatctcattgaaaaaaatgaa
acagccagatggaaaaatgtgaaagtcaacttcgataatgtgggacttggctacctctct
ctgcttcaagtagccaccttcaaaggctggatggacatcatgtatgcagctgtagattca
cgaaatgtggaaaaacagccacattatgaggataacctttatatgtatctttattttgtc
atctttattatttttggatccttcttcactttgaatttatttattggtgtcattatagat
aacttcaatcagcaaaaaaagaagtttggaggtcaagacatctttatgacagaagagcag
aaaaaatactataatgcaatgaaaaaactgggctccaagaaaccacagaaacctataccc
aggccagcaaacaaattccaaggcatggtctttgattttgtaacaaaacaagcctttgac
atcagcatcatgattcttatctgccttaacatggttaccatgatggtagaaactgatgac
caaactgatgcaatggaaactaatttgtatcgaattaatttgatcttcatagtccttttt
actggagaatgtgtcttgaaactgatttcgctccgctattattattttacaataggctgg
aatatttttgattttgtggttgtcatcttatctattgtaggtatgttcctcgcagagatt
attgagaaatactttgtgtcccccactttgttccgagtaattcggcttgcccggataggt
cgaatcctgcgtctgatcaagggggcaaaagggatccgcactctgctctttgccttgatg
atgtctctccctgccttgttcaacattggtctcctccttttcctggtcatgttcatctat
gccatatttggaatgtccaactttgcctacgtgaagagagaagttggcattgatgacttg
ttcaactttgaaacttttggcaacagcatgctctgcctctttcagatcaccacctctgct
ggctgggatggcctgctagcacccatcctgaacagcgggcctccagactgcgacccggag
atagaccacccgggtagctcagtcaagggagactgtggcaatccttcggttgggattttc
ttcttcgtcagctacattatcatctcatttttagttgtagtgaacatgtacattgctgtc
attttggagaacttcagcgtcgctaccgaagaaagtgctgagcctttgagcgaggatgat
tttgagatgttctatgaggtctgggaaaagtttgatccggatgcaacccaattcatagaa
tttgccaaactctctgattttgcagcctctttggatcctcctcttctaataccaaaacca
aacaaagttcagcttattgcgatggacctgcccatggtgaatggtgatagaattcactgc
cttgacatcttgtttgctttcaccaaacgtgtcttgggtgaaagtgatgaaatggacgcc
ctccgtattcaaatggaagatcggtttatggccgccaatccttcaaaagcctcctatgaa
ccaattaccaccacattgaaacgaaaacaagaggaagtatctgctgttattattcagcga
gcctttaggcgctacctcttaaggcaaaaagttaaaaaaatttcccacatgtttaataaa
gatagaattaaagaaggcaacgatacagttatcaaagaagatatgatcattgataagcta
aatgagaattctactcctgaaaaaaacgatatgactccctccaccacctctcccccttcc
tatgatagcgttacaaagcccgacaaagataaatatgagaaagacaaatcagaaaaagaa
gatagaggtaaagatgtcagggactataaaaaatga
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integrated database retrieval system
