Crotalus tigris (Tiger rattlesnake): 120315539
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Entry
120315539 CDS
T08476
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120315539 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120315539 (SEC24C)
Membrane trafficking [BR:
ctig04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120315539 (SEC24C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
120315539
NCBI-ProteinID:
XP_039215966
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MSVNQQAHTGPSYGQSQPGYANYMQPDYGGHQMQSVPASQYGPYNGPVTGYQQAGPPQGY
YPSLGFPSKNPPVSLDSDASFAPNSLGSLRAPPTSSGASASTSGTLIPSGQPACSQLGQG
DVRNGIPASTVPLQRASASQQFVAGTAPPSVAHPPAFQQYGLPPTSTQQLANQMAEMQIG
RGSSSIPSPAGLNYGPPTSVIPASGSFIAPGSGQYMSHSGQGPPPPNVSHGLPPTTLSQG
SGPSALHTSSQPPLFAPPPSSAGVGASSYPPATGISRPPTMQGALLPGPPIAGLLTSQPN
HVTSPPPQPLMTGPLPRPPVTGLQGPPPVHPSQPGYALQQNGSFGQNRGTQPMYGAAFPG
PANYGSQPAAPPPLPKRLDPDSIPSPQLNELPPQQKPRHRIDPDAIPSPIQVIEDDRNNH
GSEPFITGARGQVPPLVTTNFLVKDQGNTSPRYIRCTSYNIPCTSEMAKQSQVPLAAVIK
PLATLPTEEAPPYLVDHGESGPIRCNRCKAYMCPFMQFIEGGRRFQCCFCNCVTEVPSHY
FQHLDHTGRRVDYYDRPELSLGSYEYLATVDYCKNNKYPNPPAFIFMIDVSYNAVRSGLV
RLICEELKTLLDYLPREGTMEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDIADMF
VPLLDGFLVKVSESRAVFTSLLDQIPDMFADTRETETVFAPVIQAGMEALKAADCAGKLF
IFHTSLPIAEAPGKLKNRDDKKLMNTDKEKTLFQPQTNFYNNLAKDCVAQGCCVDLFLFP
NQYLDVATMGVVPYQTGGSIYKYTYFQVETDQERFLNDLRRDVQKEVGFDAVMRVRTSTG
IRATDFFGAFCMSNTTDVELAGLDCDKTITVEFKHDDKLREDSGALLQCAVLYTSCAGQR
RLRIHNLSLNCCTQLADLYRNCETDTLINFLAKFAYRGVLNSPVKTVRDTLINQCAQILA
CYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGSEVTTDDRSYIRQLISTMDV
AETHVFFYPRLLPLTKIDYNSNALPTAIRNSEERLSKGDIYLLENGLNIFLWVGVNVQQG
LIQNLFGVSSFSQINSSMCTLPVLDNPFSKRVRSIIDTFQAQRSRYMKLIIVKQEDKLDL
LFKHFLVEDKSMNGGASYVDFLCHMHKEIRQLLS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaaccagcaagctcacacggggccatcttatggacaatcacagcctggatat
gcgaattacatgcagccggactatggaggacaccaaatgcaaagtgttcctgcctctcag
tacggtccttacaatggcccagtgacaggataccaacaagcaggccctccccaaggttac
tatccttccctggggtttccttctaagaatcctcctgtctctcttgattctgatgcttcc
tttgctcctaactccctaggttctctaagagcgccccccacctcatctggagcatctgca
tcaacatctggaacgttaatcccttctggacagcctgcctgtagtcagcttggacaagga
gatgtacgaaatgggatacctgcttctacagttcccttgcaaagagcctctgcttctcaa
cagttcgtggcaggcacagcacctccttctgtggctcaccctcctgctttccagcaatac
ggactgcctccaactagcacccaacagctggccaatcagatggcagaaatgcagataggc
agggggtcatcctctattccatccccagctggattgaactatggtcctccaacgtcagtt
atacctgcctcaggaagttttattgcccctggatctgggcaatatatgtcacattcaggc
caaggtccaccacctccgaatgtttctcatggattgcctcctaccactttgtctcaggga
tcgggtccctcggccctgcatacttcctctcaaccccccctatttgctcccccaccttca
tctgctggggttggagcatccagttatcctcccgctacggggatttcaaggcctcccaca
atgcagggtgcgttgttgcctggaccaccaattgctgggctgctgacttcccagccaaat
catgtgacctcaccaccacctcagccacttatgacaggaccgcttcctaggccaccagta
acaggactgcagggaccacctcctgtccatccttcacaaccaggatacgcgctgcagcaa
aatggttcttttgggcaaaataggggaactcaaccaatgtatggtgcagctttccccgga
ccagcaaattatggaagtcagcctgcagcaccaccacctcttcccaaacgacttgaccca
gactctattcctagcccacaactcaatgagctgccacctcagcagaaacccaggcacaga
atagatcctgatgcaattcctagcccaattcaggtcattgaagatgacaggaataaccat
gggtcagaaccattcatcacaggagcacgtggacaagtcccacctcttgttactacaaat
ttcttggtgaaagatcaaggtaatacaagtccccgctacataagatgtacttcttataat
attccctgcacttcagagatggctaaacaatctcaagttcctcttgctgcagttataaaa
ccgttggctacacttcccacagaagaggcccctccttatctggtggaccatggggaatcg
ggtcccattcggtgcaataggtgtaaggcgtacatgtgcccctttatgcagttcattgaa
ggaggaagacgattccagtgctgcttctgcaactgtgttactgaggtgccatctcattac
ttccagcatttggatcacacaggcaggcgagtggattactatgacagacctgaattatca
ctgggctcctatgaatacctagctaccgttgactactgcaagaataacaagtatcccaac
cctcctgcttttattttcatgattgatgtgtcgtacaacgcagtgcggagcggcttggtc
agactgatatgtgaagaactgaagaccctcctggattatctccccagagaaggaactatg
gaagaatcagccatccgtgtgggttttgtcacctacaacaaagttctacacttctacaat
gtcaagagctccctggcacagccgcaaatgatggttgtttccgatatagcagatatgttt
gtccctttgcttgatggctttcttgtaaaagtgagtgagtctcgcgctgtttttaccagc
ctgttggatcagatcccagatatgtttgctgatacaagagaaacagaaacagtgtttgct
cccgtgattcaggctggcatggaagctctaaaggctgcagactgtgctggcaagcttttc
atatttcacacatcgctgcctatcgcagaggctccagggaagctgaagaacagagatgac
aagaaactgatgaataccgataaagaaaagactctgtttcagcctcagaccaatttctac
aacaacctagccaaggattgtgtggcccaagggtgctgcgtggatcttttccttttccca
aatcagtatttggatgtagctaccatgggggtcgttccatatcagactggtggctccatt
tataaatacacatactttcaggtggaaacagatcaggaacgcttcttgaatgatttacgt
agagatgttcaaaaagaagttggatttgatgcggtgatgagagtgcgtactagcacaggt
attcgagcaacagatttctttggagctttctgtatgagcaatacgacagatgtggaatta
gcaggtttagactgtgacaaaacaatcactgtggaatttaaacacgatgacaagctaaga
gaagacagtggagccttacttcagtgtgctgtattgtataccagttgtgcaggacagagg
cgcctgcgcattcacaatctctccctgaactgctgcacacagctggctgacctttatagg
aactgtgagacagacacactgatcaactttctggctaaatttgcatatcgtggagtactg
aacagtccagtcaaaactgtgagagatacattgatcaatcagtgtgcccagatcttagca
tgctatcggaaaaactgtgctagcccttcttctgctggacagctgatccttcctgaatgc
atgaaacttctccctgtgtatttgaactgtgttttgaaaagtgatgtgctccagcccgga
tctgaggtcaccactgatgatcggtcctacatccgccagctaatcagtactatggatgtt
gcagaaacgcacgttttcttttatcccagactgttaccactgaccaaaatagattacaac
agcaacgccttaccaacagcaatcagaaactcagaagaacgtctctccaagggtgacatt
tacctactagaaaatggcctgaatatatttttatgggtaggagtaaatgttcaacaaggc
ctgatccaaaacctctttggagtctcatcattcagccagatcaacagctctatgtgtaca
ctaccagttttggacaatcccttttcaaaaagagtgcgatccattattgatacgttccag
gctcaaagatcacgctacatgaagcttatcattgtgaagcaggaagacaaactagatctg
ctgttcaaacacttcctggtggaagataagagcatgaatgggggggcttcgtacgtggac
ttcctctgtcacatgcacaaagaaattcgccagttgttgagctag
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