Crotalus tigris (Tiger rattlesnake): 120319521
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Entry
120319521 CDS
T08476
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
ctig04141
Protein processing in endoplasmic reticulum
ctig04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120319521 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120319521 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
120319521 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120319521 (SEC13)
04131 Membrane trafficking [BR:
ctig04131
]
120319521 (SEC13)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120319521 (SEC13)
Membrane trafficking [BR:
ctig04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120319521 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120319521 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
120319521 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
120319521
NCBI-ProteinID:
XP_039224390
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPQDYGLIL
ACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSNQKPNYIK
RFASGGCDNLIKIWREEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTNTIASCSQDGRVF
IWMCDDASGNSWSPKLLHKFSDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSAITEGQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgtaattaatacagtggacacttcccatgaggatatgatacatgatgctcaa
atggattattatggcactcgattggcaacctgctcttcagacagatctgtgaaaatattt
gatgtccggaatggaggacaaattctcatagctgacttaagagggcatgaaggcccagtg
tggcaggttgcctgggctcaccccatgtatggaaacatcctagcttcctgttcctatgac
agaaaggttattatctggaaagaagagaatggtacatgggagaagacatatgaatacaca
ggacatgattcctcagttaattctgtatgttgggcaccacaagactatggattgatcctg
gcttgtggaagctctgatggggctatttctttattgagctatactggtgatggacaatgg
gaagtgaaaaaaatcagcaatgcacatacaattggttgcaatgctgttagctgggcacct
gctgttgtaccaggaagcctcatagatcagccttcaaaccaaaaaccaaactacatcaaa
cgatttgcatcaggtggctgtgataatcttatcaaaatttggagagaagaagatggccaa
tggaaagaagaacaaaaattggaagctcatagtgattgggttagagatgtagcctgggct
ccttccataggtctgccaacaaatactattgccagctgttcacaggatggcagagtgttt
atctggatgtgtgatgatgcctctggaaactcatggtcaccaaaattactccataagttc
agtgatgtagtctggcatgttagctggtccatcactgcaaatattctagctgtgtctgga
ggagataataaagtaactctatggaaagaatcagtagatggacaatgggcatgcattagt
gatgtgaataagggccaaggagcagtgtctgccattacagaaggacaacagaacgaacag
tga
DBGET
integrated database retrieval system