KEGG   Crotalus tigris (Tiger rattlesnake): 120319521
Entry
120319521         CDS       T08476                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013  Nucleocytoplasmic transport
ctig04141  Protein processing in endoplasmic reticulum
ctig04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120319521 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120319521 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    120319521 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctig03019]
    120319521 (SEC13)
   04131 Membrane trafficking [BR:ctig04131]
    120319521 (SEC13)
Messenger RNA biogenesis [BR:ctig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120319521 (SEC13)
Membrane trafficking [BR:ctig04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    120319521 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    120319521 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    120319521 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_EML Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR36-Utp21_2nd MIOS_WD40
Other DBs
NCBI-GeneID: 120319521
NCBI-ProteinID: XP_039224390
LinkDB
Position
Unknown
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPQDYGLIL
ACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSNQKPNYIK
RFASGGCDNLIKIWREEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTNTIASCSQDGRVF
IWMCDDASGNSWSPKLLHKFSDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSAITEGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtgtctgtaattaatacagtggacacttcccatgaggatatgatacatgatgctcaa
atggattattatggcactcgattggcaacctgctcttcagacagatctgtgaaaatattt
gatgtccggaatggaggacaaattctcatagctgacttaagagggcatgaaggcccagtg
tggcaggttgcctgggctcaccccatgtatggaaacatcctagcttcctgttcctatgac
agaaaggttattatctggaaagaagagaatggtacatgggagaagacatatgaatacaca
ggacatgattcctcagttaattctgtatgttgggcaccacaagactatggattgatcctg
gcttgtggaagctctgatggggctatttctttattgagctatactggtgatggacaatgg
gaagtgaaaaaaatcagcaatgcacatacaattggttgcaatgctgttagctgggcacct
gctgttgtaccaggaagcctcatagatcagccttcaaaccaaaaaccaaactacatcaaa
cgatttgcatcaggtggctgtgataatcttatcaaaatttggagagaagaagatggccaa
tggaaagaagaacaaaaattggaagctcatagtgattgggttagagatgtagcctgggct
ccttccataggtctgccaacaaatactattgccagctgttcacaggatggcagagtgttt
atctggatgtgtgatgatgcctctggaaactcatggtcaccaaaattactccataagttc
agtgatgtagtctggcatgttagctggtccatcactgcaaatattctagctgtgtctgga
ggagataataaagtaactctatggaaagaatcagtagatggacaatgggcatgcattagt
gatgtgaataagggccaaggagcagtgtctgccattacagaaggacaacagaacgaacag
tga

DBGET integrated database retrieval system