Entry |
|
Name |
(GenBank) excinuclease ABC subunit B
|
KO |
K03702 | excinuclease ABC subunit B |
|
Organism |
ctla Chlamydia trachomatis L2b/Ams2
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ctla00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L2BAMS2_00613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:ctla03400]
L2BAMS2_00613
DNA repair and recombination proteins [BR:ctla03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L2BAMS2_00613
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L2BAMS2_00613
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
656588..658594
|
AA seq |
668 aa
MGGGVLKQQFVLHAPFLPCGDQPEAIRRLSQGITDGVPAQVLLGTTGSGKTFTMANVIAN
VNVPTLVLAHNKTLAAQLYQEFKAFFPENAVEYFISYYDYYQPEAYIARSDTYIEKSLLI
NDEIDKLRLSATRSILERRDTLIVSSISCIYGIGSPDNYSSMALTLEVGKEYPRSQLSSQ
LVRMHYQASSTPQRSAFRERGSVIDIFLAYESDLAVRLEFMNDTLISIEYVDPLTMIPSH
TTSSITLYPGSHYVTPEAVREQAIRTIREELEQRMLFFEGRPVEQERLFQRTTHDIEMIK
EIGFCKGIENYSRHFTGAAPGEPPTCLLDYFPDDFLLIIDESHQTLPQLRAMYRGDQSRK
QSLVEYGFRLPSAFDNRPLTYEEARRYFHRVIYVSATPGDLEIQESRGHIIEQIIRPTGI
PDLLPEIRPAKGQIDDLLEEIRQRLRKDQEKILVISVTKKLAEDIAAFLAELGIAAAYLH
SGIETAERTQILTDLRLGNIDVLIGVNLLREGIDLPEVSLVAILDADKEGFLRSSASLIQ
FCGRAARNIHGKVICYADRITPSMDHMLKETERRRKIQLDYNQQHKITPQPIIKPILANP
ITKEAGQEETRLKMQSSKELEASIKTYEEAMYQAAQEFQFDEAAKYRDLMNAAKKQLLFQ
KGEEENGD |
NT seq |
2007 nt +upstreamnt +downstreamnt
gtgggaggaggagttctgaaacagcaatttgtattacatgctcctttcctcccttgtgga
gatcagcccgaagcaattcgcagactatcccaagggattacagatggagtccctgcacaa
gttctcttaggaaccactggatccggaaagactttcaccatggcaaatgttattgctaac
gtgaatgttcccactctggtacttgctcataataaaactctcgctgcccagctgtaccaa
gaatttaaagccttctttccagaaaatgcagtcgaatattttatttcctactatgattac
taccagcctgaagcctatatcgctcgtagtgatacgtacattgaaaaaagccttcttatc
aatgatgaaattgataagctccgcctttcagcaacacgttctatcttagaacgccgagat
actcttatcgtttcctctatttcttgcatctatggaataggatctcctgataactactct
tctatggctctcacattagaagttggtaaagaataccctcgatcgcaactctcttctcaa
ctcgtacgcatgcactatcaggcctcctctacaccacaacggagtgcctttcgtgaacgc
ggaagtgtcattgatatcttcttggcctatgaaagcgatcttgctgtacgactcgaattc
atgaacgatacgcttatttcgatagagtatgtggatccattaactatgatcccctcccat
accacctcgtccatcactctctatccagggtcgcactatgtaactccggaagctgttcga
gaacaagcgatccgcacaatccgagaagaactcgagcaacgcatgcttttttttgaagga
cgtcctgtagaacaagaacgcctctttcaacgtaccacgcatgatatcgaaatgattaaa
gaaattggattttgcaaaggaatcgagaattattcccggcattttacaggggccgctcct
ggagagccgccaacctgcctcctagactatttcccagatgattttcttttaattatcgat
gaatctcaccaaactcttccacaattacgtgctatgtatcgaggagatcagtctcgcaaa
cagtcgctagtagaatatggattccgactcccgtcggctttcgataacagaccgctcacc
tatgaagaagctcgtcgttattttcatcgtgtaatttatgtatccgcaactcctggagat
ctggaaattcaagaaagtcgtggacatatcatcgaacaaatcattcgccctacaggaatt
cctgatctcttaccagagattcgcccagctaaaggacaaatcgatgatctcttagaagaa
atccgtcaacggctccgtaaagatcaagaaaaaatccttgttatctccgtaacaaaaaaa
ttagctgaagatatcgctgccttcctcgcagagctaggtattgctgctgcatatctgcac
tcaggaattgaaacagcagaaagaacgcagatccttactgatttgcgattagggaatatc
gatgtattgattggtgtcaatcttcttcgtgaagggattgatctaccagaagtttcattg
gtagcgattcttgatgcagataaagaagggtttttacgtagtagcgcctctcttattcaa
ttttgtggacgcgcagctcgtaatattcatgggaaagtgatttgctatgcagaccgcatc
actccatctatggatcatatgctcaaagaaacagaacgacgcagaaaaatacagctcgat
tacaatcaacaacataaaatcactccgcaacctattattaaaccgatcttagctaatccg
attactaaagaagctggtcaagaagaaactcgtttaaaaatgcaatcttcgaaagagttg
gaagcctctataaaaacctatgaggaagccatgtatcaagcagctcaggagttccaattc
gatgaagctgcgaagtaccgtgatttgatgaatgcagcaaaaaaacagctcctctttcaa
aaaggagaagaagaaaatggggactga |