Chlamydia trachomatis L2b/Canada2: L2BCAN2_00640
Help
Entry
L2BCAN2_00640 CDS
T02568
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ctln
Chlamydia trachomatis L2b/Canada2
Pathway
ctln02020
Two-component system
ctln02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ctln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L2BCAN2_00640
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L2BCAN2_00640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctln03021
]
L2BCAN2_00640
Transcription machinery [BR:
ctln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L2BCAN2_00640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
DNA_pol3_delta_C
HTH_11
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
CCP68880
LinkDB
All DBs
Position
685768..687078
Genome browser
AA seq
436 aa
AA seq
DB search
MLHQHQTASVALCPALHLQQGLDMLQMPVAELATFVSQQITINPCFDLDSLDSPPESFSF
FPISEQHPFTETLSAYLLRQIDTNFASSQERTIAQYIVGNLSPEGLFLENPSLVAADLNV
SEHLFHKVWQRIQQLHPLGVGAPSLQSYWVSLLQTSPHKEALAIIRNHFPRLARCDFTTI
ARKMHATTTEILTFLRHAFASIPWCPAAGFSETLHPPAPVLPDAYLSFSRNSSWDVSINK
DCLPSIRLNDTVLDIYPSLPREEKDHLSQQIRAAKQLLRNVKKREETLLAILRVLIPYQE
EFLLKKRTSPKAFSVKQIARELSLHEATVCRAIDNKTLATPVGLLPMRSLFPQAVGSCPD
QSKATILHWIHQWISTEKHPLSDAAISQKIIEKGIPCARRTVAKYRSQLNIPPAHQRKHL
CSVLTTTRTENSRHTI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcagcatcaaacagcatctgtagctctttgtcctgctttacatcttcaacag
ggactggatatgctacagatgccagttgctgaactcgcaacatttgtgtcccagcaaatc
actatcaatccctgttttgatctcgatagcttagattctcctccagaatctttttcgttt
ttccctattagcgaacagcatccttttacagaaactctatccgcataccttcttcggcaa
attgataccaattttgcctcttctcaggaacgtactatagctcagtatattgtaggcaac
ctctccccagaaggactctttttagaaaatcctagtcttgtggctgcagatttaaacgtc
tccgaacaccttttccacaaggtatggcaacgtatccaacaattacatcctttaggagtc
ggagcgccttccctacagtcctactgggtatcgctactacagacatctccccataaggag
gctttagctattattcgcaaccatttccctagattagctcgttgtgatttcactactatc
gctaggaaaatgcatgcaaccacaacagagattcttacatttcttagacacgcttttgct
tccatcccttggtgtccagcagcaggcttttccgagacactgcacccccctgctccagtg
cttcctgatgcctacctttccttctcgcgaaactcttcttgggatgtctctattaataaa
gattgtctcccctctattagactcaacgacaccgtactagatatctatccttctcttcct
cgtgaagagaaagaccacctatcgcaacaaatccgagcagcaaaacaattgcttcgcaat
gtaaaaaaacgagaagaaacgttattggctatccttcgagttctcatcccctaccaagaa
gagttccttcttaaaaaacgcacctctcctaaagctttttctgtaaaacaaatagctcgc
gaactctctcttcatgaagctaccgtttgtcgtgccattgataataaaacgttagcaacc
cctgttggattactccctatgcgatcgctatttccacaagcggttggatcctgccccgat
caatctaaagcaactattttgcattggatccaccagtggatttctacagaaaaacatcct
ctatctgatgcagctattagccaaaaaattattgagaagggcatcccctgcgcacgacgc
acagtagccaaatatcgttcgcaactgaatatcccccctgcgcaccaacgcaaacaccta
tgctctgttttaacaacaacacgcacagagaattctcgacatactatctaa
DBGET
integrated database retrieval system
