Candida tropicalis: CTRG_04536
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Entry
CTRG_04536 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ctp
Candida tropicalis
Pathway
ctp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTRG_04536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_04536
03016 Transfer RNA biogenesis [BR:
ctp03016
]
CTRG_04536
Enzymes [BR:
ctp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CTRG_04536
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
CTRG_04536
Transfer RNA biogenesis [BR:
ctp03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
CTRG_04536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
TUTase
Polbeta
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
8299905
NCBI-ProteinID:
XP_002550238
UniProt:
C5MEP3
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MSGNKRKGGSINSTKPKKKKVKSPSVDVQLSTNNNFVALQDHVDEDSDIEVIYEYKKPQQ
ELVLLDSEEDEDEDAENEVETKKSVDQSNPKKRKFDEVNEADDDITTETNELAKNEDFIG
FGFSSTDEEESEGEESENDDHSGAPNSQYPWIKDHDHSTQKEIADWLTMEIRDFVNYISP
SSDEIITRNKVIAALKKSISDFWPGTTVHVFGSCATDLYLPGSDIDMVVVSDTGSYENAS
RLYQLSTFLRTNKLATEVEVIAHAKVPIIKFVDPKSRLHIDVSFERTNGIDAAKRIRRWL
VSTPGLRELVLVVKQFLRTRRLNNVHVGGLGGYATIIMCYHFLRLHPKITTDAMSALDNL
GVLLIEFFELYGRNFSYDDLVLALDPENEEPKYVRKSKSPLQHSARSSFAIIIQDPADPS
NNITRSSYNLRDLKKAFGGAYQLLSEKCYQLNAASYKERLGSSILGDIIKYTGKERNFSD
DRHKVVNHALVKHDDDDDGQEDDAESDGQNGNDKYYFSDMTDESDEPYVPSVAKPTPTPL
TKKPKDTKKLIESMLSLNNSSDEDKGSKEENEEYVPTVGTKKPKSNLDKDVRRDYWRQKG
LDL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaataagcgtaaaggaggatcgattaattcaacaaaaccaaagaaaaagaaa
gtaaagtccccttcagtggatgttcaactaagtaccaacaataattttgtagctttacaa
gaccacgttgatgaggattcagatatagaagttatctatgagtataaaaagccccaacaa
gaattagtgttacttgacagtgaggaagatgaagatgaagatgcagaaaatgaagtggaa
actaagaagtcagttgaccaatcgaacccaaagaagcgtaagtttgacgaggttaacgaa
gctgatgatgatattactactgaaacaaacgagttggcaaagaatgaagatttcattgga
tttggttttctgtctaccgatgaagaagaatccgaaggagaagagagtgaaaatgatgat
cacagtggtgctccaaactcccaatacccgtggattaaagatcatgatcattctactcaa
aaagagattgccgattggcttaccatggaaatacgagattttgtcaactatatctcccca
tctagtgatgaaatcattacgagaaataaagtaattgctgctttaaagaaaagtatttca
gatttttggcctggtaccacagttcatgttttcgggtcctgtgcaactgatttgtatttg
cctggttccgatattgacatggtagtagtttctgatactgggtcgtatgaaaatgcgtcc
agattgtaccaactttctacatttttaagaacaaacaaattggcaactgaggtagaggtt
attgcccatgccaaggtcccaattataaagtttgtggatccgaaatcacgtcttcacatt
gatgtttcttttgaaagaacaaatggtatagatgctgctaaaagaataagaagatggtta
gtctcaactccaggacttcgagaacttgttttagttgtgaagcaattccttagaactcgt
agacttaacaatgttcatgttggtggtcttggtgggtatgctactatcatcatgtgctat
catttcttgagattgcacccaaaaatcacaaccgatgctatgagtgcattagacaatttg
ggggttttgttgattgagttttttgaattgtatggacgcaatttttcatacgacgatttg
gtattggcgttagatccggaaaatgaagagccgaaatatgttagaaaactgaagtcacca
ctccagcattcagctagaagtctgtttgctattatcattcaagatcctgcagatccttcg
aacaatataacgagatcgtcttataatcttagagacttgaagaaggcatttggtggggcg
taccagttacttctggaaaaatgttatcaattgaatgcggcttcatataaagagagatta
ggttcactgatattgggtgatatcatcaagtataccgggaaagagagaaactttagcgat
gatcgtcataaagttgttaatcatgctttggtaaaacatgacgatgacgacgatggtcaa
gaagatgatgctgaaagtgatggccagaatggaaatgacaagtattacttctctgatatg
actgacgaaagtgacgagccatatgtcccgtcagttgcgaaacctacaccaaccccttta
accaaaaagccgaaggatactaaaaaattaatcgaaagtatgttgagtctcaacaacagt
agtgatgaagacaagggactgaaagaagagaacgaagaatatgttccaactgttgggacc
aagaaaccaaagtcaaatctagataaggatgtaaggagagactactggagacaaaaagga
ttagatttgtaa
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integrated database retrieval system
