Chloroherpeton thalassium: Ctha_1678
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Entry
Ctha_1678 CDS
T00726
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
cts
Chloroherpeton thalassium
Pathway
cts01501
beta-Lactam resistance
cts02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cts00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ctha_1678
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ctha_1678
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cts02000
]
Ctha_1678
01504 Antimicrobial resistance genes [BR:
cts01504
]
Ctha_1678
Transporters [BR:
cts02000
]
Other transporters
Pores ion channels [TC:
1
]
Ctha_1678
Antimicrobial resistance genes [BR:
cts01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ctha_1678
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Ctha_1678
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Ctha_1678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Luciferase_N
Motif
Other DBs
NCBI-ProteinID:
ACF14136
UniProt:
B3QT37
LinkDB
All DBs
Position
complement(1983577..1985016)
Genome browser
AA seq
479 aa
AA seq
DB search
MKTIHSMYNQSYKKNRVWVLLIAILSVGLASCQSYKELEKPPQIDTEGIVRGGAQAKGDS
TTIADIPWKEYFPDKYLQALIAEGLEKNLDLQIALARIKQSKASLSISRDAGDPSLSIGA
EIDHARTSSGDDGKKVLGYTTNQNSLGFVASWEIDLWGKLNSSARAEYANYLNSREYKNL
VQTELIANIATAYYNLLALDKKLQVTEETVVLLKKSTETMEALKEAGQQNAASVEQSRAL
LYSTQLSIPPLKSQIRTQENAICILLNRDLGTIERASIDNQKVATKLDYGVPAQLLSKRP
DVKQAELSLLAAYAATDAAEASFYPSLNISSASFGFASGSFSNFFKIENLAANIVASLTQ
PIFNKSQLTGNLKIAKAQQEEALLAFRSTVISAGQEVSDILYNYEASLGKNDYRNKQISS
LANAVDYTQELLIAGEAYYTEVLSAQQDLLSAQLSRIDDKLEQLNYGVNLYKALGGGTH
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatccattccatgtacaatcagtcatataaaaagaatcgcgtgtgggttttg
ctcatcgcgattctctcggtaggattagcctcttgccaaagctataaagaacttgaaaaa
ccgccgcaaatcgacacggaaggcatcgttcgaggcggcgcgcaagccaaaggcgacagc
accacgattgccgatattccatggaaagaatattttccagacaaatatcttcaagcctta
attgcggaaggacttgaaaaaaacctcgatcttcagatcgccttagcgcgaattaagcag
tccaaagccagcttaagcatttcgcgcgacgctggcgatccatcgctttccattggcgcg
gaaattgaccacgcgcgcaccagctccggcgacgatgggaaaaaagtccttggctacacc
accaatcaaaactcgctgggctttgtcgcttcgtgggaaattgatttatggggaaaatta
aatagctcagccagagcggaatatgccaattatctcaacagccgagagtataaaaatctc
gtgcaaactgagcttattgccaacattgcaacggcttactacaatttgctagcgttagac
aaaaaattgcaagtaaccgaagaaaccgttgtgttgctaaagaaaagcaccgaaacaatg
gaagcattgaaagaagccgggcagcaaaacgccgcgtctgtggagcaaagccgcgcattg
ctttatagcacgcagctttccattccaccgctgaaaagtcaaatcagaacacaggaaaat
gccatttgcattttgctcaatcgcgaccttggcaccatcgaacgcgcatcgattgacaat
cagaaagtcgccacaaaactcgattatggcgtgccagcacaattactttccaaacgccca
gatgtgaaacaggccgaactttcgttgctggccgcctatgcggctaccgatgcagccgaa
gccagtttttatccgtcgctcaacatcagttcagcgtcattcggattcgcttcgggtagt
ttttctaacttttttaaaatcgagaatcttgcagcaaatattgtagccagccttacacag
ccgattttcaacaaaagccaattgaccggtaatttgaaaatcgccaaagcgcaacaggaa
gaagcactccttgcctttcgcagcacggtgatcagcgctggccaagaagtgtccgatatt
ctttacaactacgaagcgtcgcttggcaaaaatgattatcggaataagcaaatttcatcg
ctcgctaacgcggttgattatactcaggagctgctgatagctggtgaagcttattacacc
gaagtgctctcagctcagcaggacttgctttcggctcagctcagccgcatcgatgataaa
ctggaacaattaaattatggcgtgaatctgtataaagcgctcggcggcggcacgcattaa
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