KEGG   Cyprinodon tularosa (White Sands pupfish): 119773992
Entry
119773992         CDS       T07496                                 
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ctul04131]
    119773992 (copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ctul04147]
    119773992 (copb2)
Membrane trafficking [BR:ctul04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    119773992 (copb2)
Exosome [BR:ctul04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   119773992 (copb2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_HPS5 ANAPC4_WD40 PEP5_VPS11_N Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 119773992
NCBI-ProteinID: XP_038127175
LinkDB
Position
Unknown
AA seq 934 aa
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTSGKIIWAKHSEIQQANLKAMGEAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSIVKIFKNFKE
NKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMAEKVAASQENNEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGNLDQCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLREAFAAEHYLRETCIGSSRPAKDYPLVTPNEDRNILEEA
QGYEPKGTFVPFSPQTKDSDETSSVPAAFETPSQPEPAAPEAAVKKEEVVEEKLTFSQSE
KEKTLDELEVDLDNMELDDIDTSDVNLDDDFLDD
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgcctctgaggctggacattaagcggaggctaacagccaggtcggaccgtgtaaagagt
gttgatcttcacccaaccgagccatggatgctggccagtctttacaacggcagcgtctgc
gtgtggaaccatgaaacgcagactctggtcaagacctttgaagtgtgtgacctgcctgtc
agagcgtccaaatttgtagccaggaagaactgggtcatcacaggagcagatgacatgcag
atccgtgtgtttaactataacaccttagaacgggttcatatgtttgaggcccactctgac
tatatccgttgcattgctgtccatccaacccagccgtacatccttaccagcagtgatgat
atgttgatcaagctgtgggactgggacaagaagtggtcatgcagccaggtgtttgagggt
cacactcattatgtgatgcagattgtcatcaatcctaaggacaacaatcagtttgctagc
gcctctttggatagaacaattaaggtgtggcagctgggttcttcctctcccaatttcact
ttggagggtcatgagaagggagtgaactgcatcgactactacagcggtggagacaaaccc
tacttgatttcaggggcagatgatcgccaggtcaagatttgggactaccagaataagacc
tgcgttcagactctggagggacatgcccagaatgtctcctgtgtcagcttccacccagag
ctccccataattatcacaggttctgaggatggtacggtgcggatctggcactcaagcacc
taccgcctggaaagcaccctgaactacggcatggagcgagtgtggtgtgtatgtggtctt
agaggctctaacaatgtggcactgggatatgacgaaggaagcattatcatcaaagttgga
cgagaggagccagcaatgtctatggacaccagtgggaagatcatctgggccaaacacagt
gaaatacagcaggccaacctgaaagccatgggtgaagcagaaattaaagatggagagaga
ctgccgctggctgtgaaagacatgggcagctgtgagatttaccctcaaaccatccagcat
aacccaaatggacggtttgttgtcgtttgcggcgatggagagtatatcatctatactgca
atggctctgaggaacaagagcttcggctcagctcaggagtttgtctgggcccacgactcg
tccgaatatgccatcagagaaagcagcagtattgtcaaaatcttcaaaaacttcaaagaa
aataaatctttcaagcctgactttggagcagaaggaatctatggggggttcctgcttggg
gtgaggtctgtaaacggtctggcattttatgactgggagaacacggagctaattcgtcgc
atcgagatccaacccaaacatatcttttggtcggactctggtgagttggtctgcatcgct
acagaggaatcattcttcattctccgttacatggcagaaaaagtagctgcctcccaggaa
aacaatgagggagtaacagaggatggcattgaagatgcctttgaggtcctgggagagatc
caggagatcgtaaagactggactttgggttggagactgcttcatctacaccagttctgtt
aacagactcaactactatgtgggaggcgagattgtcactattgcacacctggacagaacc
atgtaccttctgggttacattccaaaggatgaccgcctctaccttggtgacaaggagctc
aacattgtcagctattcgctgttggtttctgtcctggagtatcagactgctgtgatgaga
agggactttgggatggcagacaaggtgctgcctaccatccccaaagagcaaaggaccagg
gttgcacatttcctggagaaacagggcttcaaacagcaggcgttggccgtatctacagac
ccagagcacaggttcgagttggccttgcaactgggggagctgaagattgcctatcagctg
gctgtggaagcggaatcggagcagaaatggaagcagttggcagagctggccatcagtaaa
tgccaattcagcttagcccaggagtgcctgcaccatgctcaggattatggcggcctgcta
ctgcttgcaacagcgtcaggtaacgccaccatggtgggcaagctggccgaaggggcggaa
agggatggcaagaacaacgtggccttcatgacatatttcctgcaggggaacttggatcaa
tgtttggaactcctaatcaagactaacagactaccagaggctgcgttcttggctcggaca
tacctccctagtcaagtgtcccgtgtggtcaaactatggagggaaagtttggctaaagtc
aaccagaaggcagccgaatcacttgccgaccccacagagtacgagaacctgtttcctggg
ctgagagaagcttttgcagctgagcattacctgagagagacgtgcatcggcagctcccga
cctgctaaagactatccactcgttacacccaatgaggaccgaaatattctggaggaggca
cagggatatgagcctaaaggcaccttcgttcccttttcaccccagacgaaagatagtgat
gaaaccagctcagtgccagcggcctttgagacgccttcacagcctgaacctgcagctcct
gaggcagcggtgaagaaggaggaggtggtggaggaaaaacttacattctctcagtcagag
aaggagaagactctggatgagttggaagtggacctggacaacatggagctggatgacatc
gacacctcagacgttaaccttgatgatgacttcctagatgattga

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