KEGG   Cyprinodon tularosa (White Sands pupfish): 119775511
Entry
119775511         CDS       T07496                                 
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctul03019]
    119775511
   03036 Chromosome and associated proteins [BR:ctul03036]
    119775511
Messenger RNA biogenesis [BR:ctul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     119775511
Chromosome and associated proteins [BR:ctul03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    119775511
SSDB
Motif
Pfam: TNRC6-PABC_bdg M_domain Ago_hook UBA_7 UBA RRM_1 RRM_occluded UBA_NBR1_C Mei5_like
Other DBs
NCBI-GeneID: 119775511
NCBI-ProteinID: XP_038129427
LinkDB
Position
Unknown
AA seq 1854 aa
MEEKKKKKQEEKNKKEITQKKAADQKPKVPEAVPTKPSPGSSRHLQTSSPTLPLSSCPPA
NAKGPPLGSQGLTQNPPQQQSQLSSAGPRYPPREVPPRFRQQEHKQLLKRGQPLPAGALG
ALTLPPSSPSSSSAPLSSSSTTSKSAAPNSATSAPSKHSPDISLLSSCGTQYARSHWGAS
VPVDGPSSGKSWDKVIIDGSDKEAWPSINRDIDSGQPAIPECSLGSASSKLDTSAVTLSR
SGLLSMAAGATGQQAYYNSLKPNSNMTGPVSASTLAASRGWGSDVKQEAMNGGRVAAPSN
WGSSNYNLNLNPNANPSAWPVLGHEGGAGGINGPSSSSLPMGMNGNADNGGGGWGSMISA
NDNDQQHLSTNKNLSLNMEPANLNTDGPNYTKQQPAQEPMSPIHGLTGWGGHSPTESSQL
SGDTTGSSVWGGEENKVTESPKDSGWDSSPGGLSAWGRQGSGGGSSGSGGWGDWGKSPGA
GEVSKGWDSGDAGTPVLGQEQPMSSWGKQPGTAPASEDSGGSSEGRSRRRDRSSSMDFGP
LLPRQDLDPRVLSNSGWGQTPVRQHTVWEMEEANSDDGKSNSSSDTMGSSSSNGGPSSTN
GGAINPNVGTSQRPGSGGKRDNEGSSSSGWGAPPPQPIQTGSGWGEPQPSVTKVPNGSAC
GWGDPPPSGGSRNEVTSSWGSDKSSNWDDGMMKNKSSNWGEGPKTPHGWGNNNGGSNGDW
GAPDIKKNGSSCNMWDGEEGNRETSGWNASPRGENRGGGNWGKSTPPVSSGNWGESQRSS
GPVQGGWSSSKPQESSSSGSSTGSGGCISIGSWGGPGSVKQTNSGWGNAGKPEPGMEPTG
WEEPSPPSVHRKMEIDDGTSTWGDPNTYSKTVNMWDRNNPNNNPNHSGPPPSKNGAITMI
NNNNNHSHHMHHHSLNGQPPSRMLHQGNNNGSPNGAASHPAGGPQGRPPLANPGWGELPS
VQPKSEQAWGEPAAPTSAVDNGTSAWGKPPGGLGGWGDGGHEPSGPYVRSNGPTGSAPCK
SGPKPMQDGWGNGEEMSMSTSQWDTEDGDVWNSPASQDSSSSCNSWGNGLKKCPSKGKIG
SKQDETWIMNRLIKQLTDMGFPRDPAEEALKSNNMNLDQAMTALLEKKTDLDKRGLGISD
YSNGMNKTLVCRPSALSKDLSDRNAFLDKDGVLSDDAPPSPFLPSPSQKLPLANSSLPGQ
GLGQGNLGLAMQNLNSRQIPNGMFGSNGAAQARAMQQQQPPQPPVPPLSSSQPGLRAQVP
QFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQQMTLLYQLQQLQMAYQRLQIQQQMMQA
QRNVSGPIRQQEQQVARTITNMQQQIQQHQRQLYQALLIKQQQVPSHSSSSSAGLHPHGG
PPGVPGSGKSTLDPFGGPHQTRGLADTLHTKEPPSSPNAYSTYPLSGLNPNMNVNGMDVG
GLSLKEPPQPQSRLSQWTHTNSMDNLSGNSSNLENNFNNKHGAMSAASTIGPPGKPPQME
DSYSPYNLISNSESPSSPLVPPDSWGQGKSPNEKISNGANINWPPEFCPGVPWKGLQNID
PENDPNMTPGSVPSGPTINTNIHDVNRYLLRDRNGGKLTEMKSTWSPGPIAQNQASLSHE
LWKVPQGPRSTAAPSRPPPGLTSTKPSSTWGGNSLGLAQGWSAAYSSEGNAWSTDSPNRT
SSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKDEAAKAQKSLHMC
VLGNTTILAEFAGEEDINRFFAQGQSLGANTTSWHANPGSNQDRMGGAAQSHAIGQWSSG
GSGGKASGSDLLWGGVPQYSSLWGPPNGEDARVIGSPTPINTLLPGDLLSGESM
NT seq 5565 nt   +upstreamnt  +downstreamnt
atggaagagaagaaaaagaaaaagcaagaagaaaagaacaagaaggaaatcactcagaaa
aaggctgctgatcagaaacccaaagtgccagaggctgtccccactaagcccagtcctggt
tcatctcgccaccttcaaacctccagccccacactgcccctctcctcctgtcctcctgct
aatgccaagggccccccgttgggcagccagggcctgactcagaacccccctcagcagcag
agccagttgtcctctgccggtccccgctacccgcccagagaggtgcccccgcgcttccgt
cagcaggagcacaaacagctactgaagagaggccagccgctgcctgcaggagccctgggc
gctctcaccctccctccttcctctccctcatcttcctcagcgcctttgtcctcgtcttct
acgacttccaagagcgctgccccaaactctgccacgtccgctccaagcaaacacagccca
gacatatccctactgagcagctgtggtacccagtatgctaggtctcattggggagcctct
gtacctgttgatggaccttccagtggcaagagctgggacaaagtgatcattgacggaagt
gataaagaagcttggccctccattaatcgtgatatagactctggacagccagcgattcca
gaatgttccttgggctcagctagctctaaactggacaccagtgctgtcactttgagtagg
agtggtcttctgagtatggccgcaggtgctactggccagcaggcctactataactctcta
aaaccaaacagtaacatgacgggacctgtgtcagccagcacattagcggctagtagaggc
tggggctcagatgtcaaacaagaggccatgaatggtggaagagtagcagcccccagtaac
tggggatcctctaattataacttgaacctcaaccccaatgccaacccatcagcttggcct
gttctgggacatgaaggtggggcgggaggtattaatggccccagctcttcctccctacca
atgggcatgaacgggaatgcagacaatggtggggggggttggggcagcatgataagtgct
aatgacaatgatcagcagcacctttcaaccaacaaaaatctatctctcaacatggagcct
gctaaccttaacactgatggaccaaactacactaaacaacaaccagctcaggagccaatg
agccccatccacggtctgactggctggggtggtcattcacccactgaatcttcccagctc
agtggggacacgacaggcagctccgtgtggggtggagaagaaaacaaggtgaccgagtcc
cccaaagactcaggctgggactcgtctcctggaggcctttctgcctggggccgtcaaggc
agcggtggtgggagtagtggcagtggaggctggggagactggggaaaatcccccggggct
ggtgaggtatccaaaggctgggactcaggggatgctggtactcctgttctaggccaagag
cagccaatgagctcttggggcaaacaaccaggaacagctccagccagcgaggatagcggt
ggtagcagtgaagggcgatcccgccgcagagacagatcctccagtatggattttggccct
ctgcttccccggcaggacttagacccccgagtgctgagtaactcgggttggggccaaacc
cccgtcagacagcacactgtatgggagatggaagaagccaattctgatgacggaaagagc
aatagcagctcagacaccatgggatcctccagctccaatggtggaccatcatcaaccaac
gggggtgctatcaacccaaatgttgggaccagccagaggcctggatctggaggaaaaaga
gacaatgaaggttcatcctcctctggttggggggctcctccaccgcagccaatccaaact
ggatcaggatggggggaaccccaaccttctgtaaccaaagtcccaaacggctcagcctgt
ggctggggagaccctccaccctccggtggttcaagaaatgaggtcacatcatcctggggt
tcggataagtcctctaactgggatgatggtatgatgaagaacaagtctagcaactgggga
gaaggccccaaaaccccccacggctggggcaacaataatgggggatccaatggggactgg
ggagcgccagacatcaagaaaaatggttcctcctgcaacatgtgggacggagaagaagga
aatagggaaaccagcggatggaatgcaagcccaagaggagaaaacagaggaggcgggaac
tgggggaaatccactcctcctgtgagcagcggtaactggggagagagccaacgttccagt
ggcccagtgcagggaggctggagctcctccaagccccaggaaagcagcagcagtggcagc
agtactggcagtggaggatgtatcagcattggttcctggggtggtcctggctctgtgaaa
caaaccaactctggctggggaaacgctggcaaaccggagccgggcatggagcccaccggt
tgggaagaaccctctcctccctccgtccaccggaagatggagatcgatgacggaacgtca
acctggggagatcccaacacctatagcaagacagtcaacatgtgggatcgcaacaatccc
aacaataaccccaaccacagcggcccaccgcccagcaagaacggtgcaataactatgatc
aataataacaacaatcattctcaccacatgcaccaccattccctcaacggccaaccccca
agtcgcatgctgcaccaaggaaacaacaatgggtcaccaaacggtgctgcctcgcatccc
gctggggggccacagggtagaccaccactcgccaatccaggttggggagagctccccagt
gtccagcccaagtcggagcaagcatggggagagccagcagctccgacttcagctgttgac
aatggtacatctgcttggggtaaacccccaggtggtcttggaggatggggagacggtggc
catgagccatctggcccgtatgtccggtcgaatggacccacaggttctgcaccttgcaag
tcaggccccaaacctatgcaagatggctggggaaatggagaggaaatgagcatgtctacc
agccagtgggacactgaagatggggacgtatggaacagtccagcgtcacaggacagcagc
tcctcctgtaactcctggggcaacggactcaaaaagtgtccaagcaaggggaaaatcggc
agcaagcaagatgagacttggatcatgaaccgcctcattaaacagctgactgacatgggc
tttccgagagaccctgctgaggaggccttgaagagcaacaacatgaaccttgatcaagcc
atgactgctctcctggagaagaagacagacctggacaagcgaggcttggggatatccgac
tacagcaacggcatgaacaagaccttggtgtgtcggccctccgcactctccaaagacctc
tctgaccgcaacgcatttcttgacaaggatggcgtcctgtcggatgacgctcctccatca
ccatttttgccttcccccagccagaagctccccctggccaacagtagccttcctgggcag
ggtttggggcagggcaatctggggctggccatgcaaaacttgaacagcagacagataccc
aatggaatgtttggcagcaatggagcagcacaagcccgggccatgcagcagcagcagcct
cctcagccaccagtgccacctctcagctcctcccagcctggtctacgggctcaagtgcct
cagtttctctcccctcaggtccaagcacaactcttgcagtttgcagcaaaaaacattggt
cttaaccctgcacttttaacctcaccaataaaccctcaacaaatgaccctgttgtatcaa
ctacagcaactgcaaatggcgtaccagcgtttacaaatccagcagcagatgatgcaggcg
cagcgcaatgtttccggccccattaggcaacaggagcagcaagtcgcacgtacaatcacc
aacatgcagcagcagatccagcagcaccagcgccagctgtaccaggcgctgctgatcaag
cagcagcaggtcccctcccattcctcctcgtcctccgctggtctacacccccatggtggc
ccccccggagttcctggctccgggaaatcaaccctggacccttttggaggcccccaccaa
actcggggcctcgctgacacactgcacaccaaagagcctccgtcttcgcccaatgcctac
agcacctaccctctttctggactgaatccaaacatgaatgtaaacggcatggacgttgga
ggcttgtccctgaaggagcccccccagccccagtctcgcttgtcccagtggacacacacc
aactccatggacaacctctctggcaactcttcaaatctggagaataactttaataataag
catggtgccatgtctgctgcctccaccatcggaccgcctgggaagcccccccagatggag
gactcgtacagcccttacaatctaatctccaactcagagtcccccagcagtcccctggtg
ccccccgacagctggggccaaggaaagagcccaaatgaaaagatctcaaatggggccaat
atcaactggcctccagagttctgcccaggagtcccatggaagggccttcagaacattgac
cctgagaatgaccccaacatgacccccggcagcgtccccagcggtcccaccatcaacacc
aacatccacgacgtcaaccgctacctgctgcgggaccgtaacggagggaaactgactgaa
atgaagtccacctggtccccggggcccatcgctcagaaccaagcttctctgtcccatgag
ttgtggaaagttcctcaggggccgcgcagcaccgccgccccgtcccggccgccgcccggt
ctcaccagcaccaaaccctcctccacctggggcgggaactctttggggctggctcaaggc
tggagcgccgcctactcctcagagggaaacgcatggagcaccgacagccccaacaggacc
agcagctggctagtgctgagaaatctcaccccacagattgatggctccaccctgaggact
ctgtgcatgcagcacggccccttgatcacattccacctcaacctgactcaggggaacgcc
gtggtgcgctacagctccaaggacgaggcggccaaggcccagaagtccctgcacatgtgc
gtccttggaaacaccaccatcctggccgagttcgccggggaggaggacatcaaccgcttc
tttgcacaaggccagtcactgggagccaacaccaccagctggcacgccaacccgggaagc
aatcaggatcggatgggcggggcggcccagtcacacgccatcggccagtggagcagcggc
ggcagcggagggaaggccagcgggagcgatctgctgtgggggggagtgccccaatactcc
agtctgtgggggccgcccaacggagaggacgcccgcgtgatcgggagccccacccctatc
aacaccctgctgcctggagacctgctgagcggggagtccatgtag

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