Entry |
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Name |
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
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KO |
K18412 | trinucleotide repeat-containing gene 6 protein |
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Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
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Brite |
KEGG Orthology (KO) [BR:ctul00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ctul03019]
119775511
03036 Chromosome and associated proteins [BR:ctul03036]
119775511
Messenger RNA biogenesis [BR:ctul03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119775511
Chromosome and associated proteins [BR:ctul03036]
Eukaryotic type
Gene silencing
piRNA pathway
119775511
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1854 aa
MEEKKKKKQEEKNKKEITQKKAADQKPKVPEAVPTKPSPGSSRHLQTSSPTLPLSSCPPA
NAKGPPLGSQGLTQNPPQQQSQLSSAGPRYPPREVPPRFRQQEHKQLLKRGQPLPAGALG
ALTLPPSSPSSSSAPLSSSSTTSKSAAPNSATSAPSKHSPDISLLSSCGTQYARSHWGAS
VPVDGPSSGKSWDKVIIDGSDKEAWPSINRDIDSGQPAIPECSLGSASSKLDTSAVTLSR
SGLLSMAAGATGQQAYYNSLKPNSNMTGPVSASTLAASRGWGSDVKQEAMNGGRVAAPSN
WGSSNYNLNLNPNANPSAWPVLGHEGGAGGINGPSSSSLPMGMNGNADNGGGGWGSMISA
NDNDQQHLSTNKNLSLNMEPANLNTDGPNYTKQQPAQEPMSPIHGLTGWGGHSPTESSQL
SGDTTGSSVWGGEENKVTESPKDSGWDSSPGGLSAWGRQGSGGGSSGSGGWGDWGKSPGA
GEVSKGWDSGDAGTPVLGQEQPMSSWGKQPGTAPASEDSGGSSEGRSRRRDRSSSMDFGP
LLPRQDLDPRVLSNSGWGQTPVRQHTVWEMEEANSDDGKSNSSSDTMGSSSSNGGPSSTN
GGAINPNVGTSQRPGSGGKRDNEGSSSSGWGAPPPQPIQTGSGWGEPQPSVTKVPNGSAC
GWGDPPPSGGSRNEVTSSWGSDKSSNWDDGMMKNKSSNWGEGPKTPHGWGNNNGGSNGDW
GAPDIKKNGSSCNMWDGEEGNRETSGWNASPRGENRGGGNWGKSTPPVSSGNWGESQRSS
GPVQGGWSSSKPQESSSSGSSTGSGGCISIGSWGGPGSVKQTNSGWGNAGKPEPGMEPTG
WEEPSPPSVHRKMEIDDGTSTWGDPNTYSKTVNMWDRNNPNNNPNHSGPPPSKNGAITMI
NNNNNHSHHMHHHSLNGQPPSRMLHQGNNNGSPNGAASHPAGGPQGRPPLANPGWGELPS
VQPKSEQAWGEPAAPTSAVDNGTSAWGKPPGGLGGWGDGGHEPSGPYVRSNGPTGSAPCK
SGPKPMQDGWGNGEEMSMSTSQWDTEDGDVWNSPASQDSSSSCNSWGNGLKKCPSKGKIG
SKQDETWIMNRLIKQLTDMGFPRDPAEEALKSNNMNLDQAMTALLEKKTDLDKRGLGISD
YSNGMNKTLVCRPSALSKDLSDRNAFLDKDGVLSDDAPPSPFLPSPSQKLPLANSSLPGQ
GLGQGNLGLAMQNLNSRQIPNGMFGSNGAAQARAMQQQQPPQPPVPPLSSSQPGLRAQVP
QFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQQMTLLYQLQQLQMAYQRLQIQQQMMQA
QRNVSGPIRQQEQQVARTITNMQQQIQQHQRQLYQALLIKQQQVPSHSSSSSAGLHPHGG
PPGVPGSGKSTLDPFGGPHQTRGLADTLHTKEPPSSPNAYSTYPLSGLNPNMNVNGMDVG
GLSLKEPPQPQSRLSQWTHTNSMDNLSGNSSNLENNFNNKHGAMSAASTIGPPGKPPQME
DSYSPYNLISNSESPSSPLVPPDSWGQGKSPNEKISNGANINWPPEFCPGVPWKGLQNID
PENDPNMTPGSVPSGPTINTNIHDVNRYLLRDRNGGKLTEMKSTWSPGPIAQNQASLSHE
LWKVPQGPRSTAAPSRPPPGLTSTKPSSTWGGNSLGLAQGWSAAYSSEGNAWSTDSPNRT
SSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKDEAAKAQKSLHMC
VLGNTTILAEFAGEEDINRFFAQGQSLGANTTSWHANPGSNQDRMGGAAQSHAIGQWSSG
GSGGKASGSDLLWGGVPQYSSLWGPPNGEDARVIGSPTPINTLLPGDLLSGESM |
NT seq |
5565 nt +upstreamnt +downstreamnt
atggaagagaagaaaaagaaaaagcaagaagaaaagaacaagaaggaaatcactcagaaa
aaggctgctgatcagaaacccaaagtgccagaggctgtccccactaagcccagtcctggt
tcatctcgccaccttcaaacctccagccccacactgcccctctcctcctgtcctcctgct
aatgccaagggccccccgttgggcagccagggcctgactcagaacccccctcagcagcag
agccagttgtcctctgccggtccccgctacccgcccagagaggtgcccccgcgcttccgt
cagcaggagcacaaacagctactgaagagaggccagccgctgcctgcaggagccctgggc
gctctcaccctccctccttcctctccctcatcttcctcagcgcctttgtcctcgtcttct
acgacttccaagagcgctgccccaaactctgccacgtccgctccaagcaaacacagccca
gacatatccctactgagcagctgtggtacccagtatgctaggtctcattggggagcctct
gtacctgttgatggaccttccagtggcaagagctgggacaaagtgatcattgacggaagt
gataaagaagcttggccctccattaatcgtgatatagactctggacagccagcgattcca
gaatgttccttgggctcagctagctctaaactggacaccagtgctgtcactttgagtagg
agtggtcttctgagtatggccgcaggtgctactggccagcaggcctactataactctcta
aaaccaaacagtaacatgacgggacctgtgtcagccagcacattagcggctagtagaggc
tggggctcagatgtcaaacaagaggccatgaatggtggaagagtagcagcccccagtaac
tggggatcctctaattataacttgaacctcaaccccaatgccaacccatcagcttggcct
gttctgggacatgaaggtggggcgggaggtattaatggccccagctcttcctccctacca
atgggcatgaacgggaatgcagacaatggtggggggggttggggcagcatgataagtgct
aatgacaatgatcagcagcacctttcaaccaacaaaaatctatctctcaacatggagcct
gctaaccttaacactgatggaccaaactacactaaacaacaaccagctcaggagccaatg
agccccatccacggtctgactggctggggtggtcattcacccactgaatcttcccagctc
agtggggacacgacaggcagctccgtgtggggtggagaagaaaacaaggtgaccgagtcc
cccaaagactcaggctgggactcgtctcctggaggcctttctgcctggggccgtcaaggc
agcggtggtgggagtagtggcagtggaggctggggagactggggaaaatcccccggggct
ggtgaggtatccaaaggctgggactcaggggatgctggtactcctgttctaggccaagag
cagccaatgagctcttggggcaaacaaccaggaacagctccagccagcgaggatagcggt
ggtagcagtgaagggcgatcccgccgcagagacagatcctccagtatggattttggccct
ctgcttccccggcaggacttagacccccgagtgctgagtaactcgggttggggccaaacc
cccgtcagacagcacactgtatgggagatggaagaagccaattctgatgacggaaagagc
aatagcagctcagacaccatgggatcctccagctccaatggtggaccatcatcaaccaac
gggggtgctatcaacccaaatgttgggaccagccagaggcctggatctggaggaaaaaga
gacaatgaaggttcatcctcctctggttggggggctcctccaccgcagccaatccaaact
ggatcaggatggggggaaccccaaccttctgtaaccaaagtcccaaacggctcagcctgt
ggctggggagaccctccaccctccggtggttcaagaaatgaggtcacatcatcctggggt
tcggataagtcctctaactgggatgatggtatgatgaagaacaagtctagcaactgggga
gaaggccccaaaaccccccacggctggggcaacaataatgggggatccaatggggactgg
ggagcgccagacatcaagaaaaatggttcctcctgcaacatgtgggacggagaagaagga
aatagggaaaccagcggatggaatgcaagcccaagaggagaaaacagaggaggcgggaac
tgggggaaatccactcctcctgtgagcagcggtaactggggagagagccaacgttccagt
ggcccagtgcagggaggctggagctcctccaagccccaggaaagcagcagcagtggcagc
agtactggcagtggaggatgtatcagcattggttcctggggtggtcctggctctgtgaaa
caaaccaactctggctggggaaacgctggcaaaccggagccgggcatggagcccaccggt
tgggaagaaccctctcctccctccgtccaccggaagatggagatcgatgacggaacgtca
acctggggagatcccaacacctatagcaagacagtcaacatgtgggatcgcaacaatccc
aacaataaccccaaccacagcggcccaccgcccagcaagaacggtgcaataactatgatc
aataataacaacaatcattctcaccacatgcaccaccattccctcaacggccaaccccca
agtcgcatgctgcaccaaggaaacaacaatgggtcaccaaacggtgctgcctcgcatccc
gctggggggccacagggtagaccaccactcgccaatccaggttggggagagctccccagt
gtccagcccaagtcggagcaagcatggggagagccagcagctccgacttcagctgttgac
aatggtacatctgcttggggtaaacccccaggtggtcttggaggatggggagacggtggc
catgagccatctggcccgtatgtccggtcgaatggacccacaggttctgcaccttgcaag
tcaggccccaaacctatgcaagatggctggggaaatggagaggaaatgagcatgtctacc
agccagtgggacactgaagatggggacgtatggaacagtccagcgtcacaggacagcagc
tcctcctgtaactcctggggcaacggactcaaaaagtgtccaagcaaggggaaaatcggc
agcaagcaagatgagacttggatcatgaaccgcctcattaaacagctgactgacatgggc
tttccgagagaccctgctgaggaggccttgaagagcaacaacatgaaccttgatcaagcc
atgactgctctcctggagaagaagacagacctggacaagcgaggcttggggatatccgac
tacagcaacggcatgaacaagaccttggtgtgtcggccctccgcactctccaaagacctc
tctgaccgcaacgcatttcttgacaaggatggcgtcctgtcggatgacgctcctccatca
ccatttttgccttcccccagccagaagctccccctggccaacagtagccttcctgggcag
ggtttggggcagggcaatctggggctggccatgcaaaacttgaacagcagacagataccc
aatggaatgtttggcagcaatggagcagcacaagcccgggccatgcagcagcagcagcct
cctcagccaccagtgccacctctcagctcctcccagcctggtctacgggctcaagtgcct
cagtttctctcccctcaggtccaagcacaactcttgcagtttgcagcaaaaaacattggt
cttaaccctgcacttttaacctcaccaataaaccctcaacaaatgaccctgttgtatcaa
ctacagcaactgcaaatggcgtaccagcgtttacaaatccagcagcagatgatgcaggcg
cagcgcaatgtttccggccccattaggcaacaggagcagcaagtcgcacgtacaatcacc
aacatgcagcagcagatccagcagcaccagcgccagctgtaccaggcgctgctgatcaag
cagcagcaggtcccctcccattcctcctcgtcctccgctggtctacacccccatggtggc
ccccccggagttcctggctccgggaaatcaaccctggacccttttggaggcccccaccaa
actcggggcctcgctgacacactgcacaccaaagagcctccgtcttcgcccaatgcctac
agcacctaccctctttctggactgaatccaaacatgaatgtaaacggcatggacgttgga
ggcttgtccctgaaggagcccccccagccccagtctcgcttgtcccagtggacacacacc
aactccatggacaacctctctggcaactcttcaaatctggagaataactttaataataag
catggtgccatgtctgctgcctccaccatcggaccgcctgggaagcccccccagatggag
gactcgtacagcccttacaatctaatctccaactcagagtcccccagcagtcccctggtg
ccccccgacagctggggccaaggaaagagcccaaatgaaaagatctcaaatggggccaat
atcaactggcctccagagttctgcccaggagtcccatggaagggccttcagaacattgac
cctgagaatgaccccaacatgacccccggcagcgtccccagcggtcccaccatcaacacc
aacatccacgacgtcaaccgctacctgctgcgggaccgtaacggagggaaactgactgaa
atgaagtccacctggtccccggggcccatcgctcagaaccaagcttctctgtcccatgag
ttgtggaaagttcctcaggggccgcgcagcaccgccgccccgtcccggccgccgcccggt
ctcaccagcaccaaaccctcctccacctggggcgggaactctttggggctggctcaaggc
tggagcgccgcctactcctcagagggaaacgcatggagcaccgacagccccaacaggacc
agcagctggctagtgctgagaaatctcaccccacagattgatggctccaccctgaggact
ctgtgcatgcagcacggccccttgatcacattccacctcaacctgactcaggggaacgcc
gtggtgcgctacagctccaaggacgaggcggccaaggcccagaagtccctgcacatgtgc
gtccttggaaacaccaccatcctggccgagttcgccggggaggaggacatcaaccgcttc
tttgcacaaggccagtcactgggagccaacaccaccagctggcacgccaacccgggaagc
aatcaggatcggatgggcggggcggcccagtcacacgccatcggccagtggagcagcggc
ggcagcggagggaaggccagcgggagcgatctgctgtgggggggagtgccccaatactcc
agtctgtgggggccgcccaacggagaggacgcccgcgtgatcgggagccccacccctatc
aacaccctgctgcctggagacctgctgagcggggagtccatgtag |